Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DK181_RS07935 Genome accession   NZ_CP029490
Coordinates   1642263..1642928 (-) Length   221 a.a.
NCBI ID   WP_002960963.1    Uniprot ID   A0ABN5LKL2
Organism   Streptococcus sobrinus strain SL1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1637263..1647928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK181_RS07910 (DK182_07910) - 1638861..1639331 (-) 471 WP_002960976.1 FUSC family protein -
  DK181_RS10755 - 1639438..1639812 (+) 375 WP_002960974.1 DUF6442 family protein -
  DK181_RS07915 (DK182_07915) - 1639847..1640158 (+) 312 WP_002960972.1 DUF6442 family protein -
  DK181_RS07920 (DK182_07920) - 1640163..1640369 (+) 207 WP_002960970.1 helix-turn-helix transcriptional regulator -
  DK181_RS07925 (DK182_07925) - 1640412..1641104 (-) 693 WP_303660100.1 SDR family NAD(P)-dependent oxidoreductase -
  DK181_RS07930 (DK182_07930) - 1641325..1642266 (-) 942 WP_002960965.1 sensor histidine kinase -
  DK181_RS07935 (DK182_07935) braR 1642263..1642928 (-) 666 WP_002960963.1 response regulator transcription factor Regulator
  DK181_RS07940 (DK182_07940) - 1643037..1644992 (-) 1956 WP_019788996.1 ABC transporter permease -
  DK181_RS07945 (DK182_07945) - 1644994..1645746 (-) 753 WP_002960959.1 ABC transporter ATP-binding protein -
  DK181_RS07950 (DK182_07950) - 1646332..1646571 (+) 240 WP_002960957.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
  DK181_RS07955 (DK182_07955) - 1646568..1646786 (+) 219 WP_002960955.1 type II toxin-antitoxin system YoeB family toxin -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25239.92 Da        Isoelectric Point: 4.9498

>NTDB_id=253764 DK181_RS07935 WP_002960963.1 1642263..1642928(-) (braR) [Streptococcus sobrinus strain SL1]
MAHQGKIFIVEDDPTIVKLLKDHLSTDYQVEASQNFRDVRREVEASQADLILMDITLPYFNGFYWTTEIRKTMTLPIIFI
SSSDDEMDMVMALNMGGDDFISKPFSLPLLDAKIQAFLRRAQLFTSDDFHLGDFTLSREGVLSNGSGQVSLSPTENKILI
ILLSHQNQVVSKEELLEKLWENENFIDQNTLSVNMTRLRKKVSPLGFEHIHTVRGVGYLLK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=253764 DK181_RS07935 WP_002960963.1 1642263..1642928(-) (braR) [Streptococcus sobrinus strain SL1]
ATGGCACATCAAGGGAAAATTTTTATTGTCGAAGATGATCCAACCATCGTCAAGCTGCTTAAGGACCACCTGTCTACCGA
CTATCAGGTGGAAGCCAGTCAAAATTTTCGGGATGTCCGCAGAGAGGTCGAAGCCAGCCAAGCGGATTTGATCTTGATGG
ATATTACTCTGCCTTATTTCAATGGCTTTTATTGGACAACAGAGATTCGTAAGACCATGACCCTACCCATCATTTTTATC
TCCTCCAGCGATGATGAGATGGATATGGTCATGGCTCTCAATATGGGCGGTGATGACTTTATTTCTAAACCCTTCTCCCT
GCCTCTTCTGGATGCTAAGATTCAAGCCTTTCTCCGTCGGGCCCAGCTCTTTACCAGCGATGATTTTCATTTGGGAGATT
TTACTCTTAGCCGAGAAGGAGTTCTCTCAAATGGTTCAGGTCAAGTCAGCCTGTCGCCAACGGAAAATAAGATTTTGATT
ATTCTTCTTTCCCATCAAAATCAGGTGGTTTCTAAGGAGGAACTCTTAGAAAAGCTCTGGGAAAATGAAAATTTTATTGA
CCAGAATACCCTCAGTGTCAATATGACTCGCTTAAGAAAGAAGGTCAGCCCACTGGGCTTTGAGCATATTCACACCGTGA
GAGGAGTTGGCTATCTACTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.643

0.466
  micA Streptococcus pneumoniae Cp1015

34.934

100

0.362