Detailed information NTG0253586

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: DKG78_RS16970
• Genome accession: NZ_CP029466
• Coordinates: 3432555..3435428 (-)
• Length: 957 a.a.
• NCBI ID: WP_020954334.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HM618
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3427555..3440428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG78_RS16945 (DKG78_17230)	-	3430064..3430423 (-)	360	WP_132105768.1	phage holin family protein	-
DKG78_RS16950 (DKG78_17235)	-	3430424..3430618 (-)	195	WP_003151448.1	PspC domain-containing protein	-
DKG78_RS16955 (DKG78_17240)	-	3430623..3431720 (-)	1098	WP_007614045.1	DUF4097 domain-containing protein	-
DKG78_RS16960 (DKG78_17245)	-	3431745..3432071 (-)	327	WP_003151444.1	hypothetical protein	-
DKG78_RS16965 (DKG78_17250)	-	3432269..3432529 (+)	261	WP_132105766.1	hypothetical protein	-
DKG78_RS16970 (DKG78_17255)	uvrA	3432555..3435428 (-)	2874	WP_020954334.1	excinuclease ABC subunit UvrA	Machinery gene
DKG78_RS16975 (DKG78_17260)	uvrB	3435436..3437421 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
DKG78_RS16980 (DKG78_17265)	-	3437597..3437833 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106116.39 Da
• Isoelectric Point: 6.4819

>NTDB_id=253586 DKG78_RS16970 WP_020954334.1 3432555..3435428(-) (uvrA) [Bacillus amyloliquefaciens strain HM618]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=253586 DKG78_RS16970 WP_020954334.1 3432555..3435428(-) (uvrA) [Bacillus amyloliquefaciens strain HM618]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAACCGCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCTGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTCGTCATTGACCGGATCGTTGTCAAGGAAG
GGGTTGCCGCCCGGCTTTCCGACTCGCTGGAAACCGCGCTCCGCTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGCTGTGCGGTTTTTCTATCGGAGAGCTTGAACCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGTTTGAAGCTGGAAGTGGACCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCAATGAACGGATTTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGTAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTCTGGTCAACGGGCGTCA
TATCGGGACCATTACGGAGCTTTCCGTCGGCGATGCGCTGGAATTTTTCAAAAACCTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAACGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTACCTGACGCTG
AGCCGGGCGGCGGGAACGCTGTCAGGCGGAGAAGCCCAGCGCATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCAGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTGGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCTGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAAATCAAAGGCCTTGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTACACGGGTGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCATGGCAAACGTTACAACCGGGAGACGC
TGGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTTAAGCTCGCTTCCGAACTGCATAAGCGATCCACCGGCCGGACGCTGTATATTC
TGGACGAACCGACGACAGGCCTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGACATCATTAAAACGGCGGACTACATCGTAGACCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACACCTGAAGAAGTTGTCGAAGTGAAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675