Detailed information NTG0253534

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: DKG78_RS09585
• Genome accession: NZ_CP029466
• Coordinates: 1931297..1933300 (+)
• Length: 667 a.a.
• NCBI ID: WP_032865999.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HM618
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1926297..1938300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG78_RS09545	-	1926709..1926858 (+)	150	WP_007410334.1	hypothetical protein	-
DKG78_RS09550 (DKG78_09720)	-	1926845..1927675 (+)	831	WP_007410333.1	prohibitin family protein	-
DKG78_RS09555 (DKG78_09725)	-	1927703..1928152 (-)	450	WP_052827479.1	YndM family protein	-
DKG78_RS09560 (DKG78_09730)	-	1928306..1928734 (+)	429	WP_003154006.1	hypothetical protein	-
DKG78_RS09565 (DKG78_09735)	dinR/lexA	1929074..1929694 (-)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
DKG78_RS09570 (DKG78_09740)	yneA	1929851..1930162 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
DKG78_RS09575 (DKG78_09745)	-	1930178..1930828 (+)	651	WP_132105960.1	recombinase family protein	-
DKG78_RS09580 (DKG78_09750)	-	1930897..1931130 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
DKG78_RS09585 (DKG78_09755)	recP/tkt	1931297..1933300 (+)	2004	WP_032865999.1	transketolase	Machinery gene
DKG78_RS09590 (DKG78_09760)	sirA	1933452..1933898 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
DKG78_RS09595 (DKG78_09765)	-	1933984..1934202 (+)	219	WP_003153994.1	YneF family protein	-
DKG78_RS09600 (DKG78_09770)	-	1934276..1934449 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
DKG78_RS09605 (DKG78_09775)	-	1934651..1935358 (+)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
DKG78_RS09610 (DKG78_09780)	-	1935443..1935805 (+)	363	WP_007410327.1	response regulator	-
DKG78_RS09615 (DKG78_09785)	-	1935885..1936376 (+)	492	WP_007611735.1	CcdC family protein	-
DKG78_RS09620 (DKG78_09790)	-	1936404..1936832 (-)	429	WP_007410325.1	DUF2621 domain-containing protein	-
DKG78_RS09625 (DKG78_09795)	-	1937066..1937437 (-)	372	WP_003153985.1	Hsp20/alpha crystallin family protein	-
DKG78_RS09630 (DKG78_09800)	-	1937531..1937677 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
DKG78_RS09635 (DKG78_09805)	sspO	1937707..1937853 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72556.72 Da
• Isoelectric Point: 4.9029

>NTDB_id=253534 DKG78_RS09585 WP_032865999.1 1931297..1933300(+) (recP/tkt) [Bacillus amyloliquefaciens strain HM618]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGQEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTESPAALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=253534 DKG78_RS09585 WP_032865999.1 1931297..1933300(+) (recP/tkt) [Bacillus amyloliquefaciens strain HM618]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
TCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATATACGCTGTGGACGAAATTTATGAATGTAAACCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCATAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGTATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGATCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGTTCTCCAAACCGCGCGGGGACATCCGGCGTTCACGGCGCTCCGTTAGG
ACAAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATACCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCATCATTGATGGGTCTTC
CCGTCACTTATGTATTCACACATGACAGTATTGCCGTAGGAGAGGACGGGCCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCCCAAACGGAATCACCGGCCGCTCTTCTTTTAGCGACAGGT
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCCGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTTTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.061	98.951	0.555