Detailed information
Bioinformatically predicted
Overview
| Name | vraR | Type | Regulator |
| Locus tag | DKG78_RS03510 | Genome accession | NZ_CP029466 |
| Coordinates | 656451..657086 (+) | Length | 211 a.a. |
| NCBI ID | WP_012116939.1 | Uniprot ID | A7Z1V9 |
| Organism | Bacillus amyloliquefaciens strain HM618 | ||
| Function | repress expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 651451..662086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG78_RS03485 (DKG78_03535) | - | 651776..652021 (-) | 246 | WP_007409324.1 | hypothetical protein | - |
| DKG78_RS03490 (DKG78_03540) | - | 652154..653368 (-) | 1215 | WP_132106777.1 | MFS transporter | - |
| DKG78_RS03495 (DKG78_03545) | - | 653365..654402 (-) | 1038 | WP_132106775.1 | ROK family protein | - |
| DKG78_RS03500 (DKG78_03550) | - | 654549..655085 (+) | 537 | WP_050594964.1 | sugar O-acetyltransferase | - |
| DKG78_RS03505 (DKG78_03555) | - | 655298..656458 (+) | 1161 | WP_192453010.1 | sensor histidine kinase | - |
| DKG78_RS03510 (DKG78_03560) | vraR | 656451..657086 (+) | 636 | WP_012116939.1 | response regulator transcription factor | Regulator |
| DKG78_RS03515 (DKG78_03565) | - | 657185..659338 (+) | 2154 | WP_192452877.1 | MMPL family transporter | - |
| DKG78_RS03520 (DKG78_03570) | - | 659372..660094 (-) | 723 | WP_132106769.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| DKG78_RS20360 | - | 660360..660433 (-) | 74 | Protein_660 | hypothetical protein | - |
| DKG78_RS03525 (DKG78_03575) | - | 660481..661890 (-) | 1410 | WP_032870428.1 | MFS transporter | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23622.28 Da Isoelectric Point: 5.0215
>NTDB_id=253480 DKG78_RS03510 WP_012116939.1 656451..657086(+) (vraR) [Bacillus amyloliquefaciens strain HM618]
MYKVLIADDHLVVREGLKLLIETNDHYTITGEAENGKTAVRLAEELKPDVILMDLYMPEMSGLEAIKQIKEHSDVPIIIL
TTYNEDHLMIEGIESGANGYLLKDTSSETLFHTMDAAVRGEVLLQPDILRRFREMKMERANANETQLTDKEIIVLEAVAQ
GHKSKAIAFDLGISERTVKARLTSIYNKLGADSRTEAVTIAMQKGILKLNI
MYKVLIADDHLVVREGLKLLIETNDHYTITGEAENGKTAVRLAEELKPDVILMDLYMPEMSGLEAIKQIKEHSDVPIIIL
TTYNEDHLMIEGIESGANGYLLKDTSSETLFHTMDAAVRGEVLLQPDILRRFREMKMERANANETQLTDKEIIVLEAVAQ
GHKSKAIAFDLGISERTVKARLTSIYNKLGADSRTEAVTIAMQKGILKLNI
Nucleotide
Download Length: 636 bp
>NTDB_id=253480 DKG78_RS03510 WP_012116939.1 656451..657086(+) (vraR) [Bacillus amyloliquefaciens strain HM618]
ATGTATAAAGTGTTAATAGCAGATGACCATCTTGTCGTCAGAGAAGGTCTGAAGCTTTTGATAGAAACAAATGACCATTA
CACCATAACGGGAGAGGCGGAAAACGGGAAAACCGCCGTCCGCCTCGCAGAGGAACTAAAGCCCGATGTCATTCTCATGG
ATCTGTACATGCCGGAAATGAGCGGGCTGGAAGCCATTAAACAGATAAAAGAGCATTCTGATGTGCCGATCATTATTTTG
ACGACCTATAATGAAGATCATCTGATGATAGAAGGCATTGAATCAGGCGCGAACGGTTATCTGCTGAAAGACACAAGCTC
AGAAACCTTATTTCATACGATGGATGCGGCGGTCAGGGGAGAAGTGCTTCTGCAGCCGGACATCTTGCGGCGTTTCCGGG
AAATGAAAATGGAACGGGCAAATGCCAATGAAACACAGCTGACGGACAAGGAAATCATAGTTCTAGAAGCCGTTGCGCAA
GGACATAAAAGCAAAGCGATCGCCTTCGATTTAGGAATCTCAGAGCGGACGGTAAAAGCGAGATTAACATCGATTTATAA
CAAATTAGGCGCTGATTCGCGGACGGAAGCCGTCACCATTGCCATGCAAAAAGGCATTCTGAAACTGAATATATAA
ATGTATAAAGTGTTAATAGCAGATGACCATCTTGTCGTCAGAGAAGGTCTGAAGCTTTTGATAGAAACAAATGACCATTA
CACCATAACGGGAGAGGCGGAAAACGGGAAAACCGCCGTCCGCCTCGCAGAGGAACTAAAGCCCGATGTCATTCTCATGG
ATCTGTACATGCCGGAAATGAGCGGGCTGGAAGCCATTAAACAGATAAAAGAGCATTCTGATGTGCCGATCATTATTTTG
ACGACCTATAATGAAGATCATCTGATGATAGAAGGCATTGAATCAGGCGCGAACGGTTATCTGCTGAAAGACACAAGCTC
AGAAACCTTATTTCATACGATGGATGCGGCGGTCAGGGGAGAAGTGCTTCTGCAGCCGGACATCTTGCGGCGTTTCCGGG
AAATGAAAATGGAACGGGCAAATGCCAATGAAACACAGCTGACGGACAAGGAAATCATAGTTCTAGAAGCCGTTGCGCAA
GGACATAAAAGCAAAGCGATCGCCTTCGATTTAGGAATCTCAGAGCGGACGGTAAAAGCGAGATTAACATCGATTTATAA
CAAATTAGGCGCTGATTCGCGGACGGAAGCCGTCACCATTGCCATGCAAAAAGGCATTCTGAAACTGAATATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vraR | Staphylococcus aureus N315 |
36.364 |
99.052 |
0.36 |