Detailed information NTG0253396

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: DJ572_RS12780
• Genome accession: NZ_CP029461
• Coordinates: 2461438..2462565 (+)
• Length: 375 a.a.
• NCBI ID: WP_119899591.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain QB61
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2456438..2467565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DJ572_RS12760 (DJ572_12715)	spoIVCA	2456528..2457988 (-)	1461	WP_235701260.1	site-specific DNA recombinase SpoIVCA	-
DJ572_RS21710 (DJ572_12720)	-	2457946..2458124 (-)	179	Protein_2478	hypothetical protein	-
DJ572_RS12770 (DJ572_12725)	-	2458378..2458998 (-)	621	WP_119899588.1	hypothetical protein	-
DJ572_RS12775 (DJ572_12730)	-	2459488..2461041 (-)	1554	WP_119899590.1	hypothetical protein	-
DJ572_RS12780 (DJ572_12735)	rapC	2461438..2462565 (+)	1128	WP_119899591.1	response regulator aspartate phosphatase RapE	Regulator
DJ572_RS12785 (DJ572_12740)	phrE	2462555..2462689 (+)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
DJ572_RS12790 (DJ572_12745)	-	2463323..2464045 (-)	723	WP_119899593.1	NAD(P)-binding domain-containing protein	-
DJ572_RS12795 (DJ572_12750)	-	2464271..2464630 (+)	360	WP_049635841.1	winged helix-turn-helix transcriptional regulator	-
DJ572_RS12800 (DJ572_12755)	nfsA	2465110..2465850 (+)	741	WP_119899595.1	oxygen-insensitive NADPH nitroreductase	-
DJ572_RS12805 (DJ572_12760)	rapC	2466328..2467455 (-)	1128	WP_038429342.1	Rap family tetratricopeptide repeat protein	Regulator

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44606.38 Da
• Isoelectric Point: 7.5797

>NTDB_id=253396 DJ572_RS12780 WP_119899591.1 2461438..2462565(+) (rapC) [Bacillus subtilis strain QB61]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDSFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=253396 DJ572_RS12780 WP_119899591.1 2461438..2462565(+) (rapC) [Bacillus subtilis strain QB61]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAATGTTACGGA
TGCTGAAATGTTAAAGGCTGAAATAGAACGTGATATAGAGGTTATGGAAGAAGATCAAGACTTGCTTATTTATTATCAAC
TAATGGCCTTTCGACATAAAATCATGCTGGAGTATACGCTGCCATCTGATGAAAATCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGACATAAGAAGAAGCTAGACAATATGCGAGCGTATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCTGAAGTCTATTATCATATGAAAATGACTCATATCTCAATGCACTACGCCGAG
CTTTCATACAATATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCGCGT
TACATCGAACAAGCTTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTCCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTC
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAATCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (184-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	40.897	100	0.413
rapF	Bacillus subtilis subsp. subtilis str. 168	38.196	100	0.384