Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   DJ572_RS09445 Genome accession   NZ_CP029461
Coordinates   1855733..1856350 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain QB61     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1850733..1861350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS09415 (DJ572_09395) yndJ 1851063..1852703 (+) 1641 WP_119899447.1 YndJ family protein -
  DJ572_RS09420 (DJ572_09400) - 1852781..1853095 (+) 315 WP_201757448.1 hypothetical protein -
  DJ572_RS09425 (DJ572_09405) pghL 1853319..1854077 (+) 759 WP_119899451.1 gamma-polyglutamate hydrolase PghL -
  DJ572_RS09430 (DJ572_09410) - 1854104..1854553 (-) 450 WP_003245454.1 YndM family protein -
  DJ572_RS09435 (DJ572_09415) fosM 1854761..1855195 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  DJ572_RS21685 - 1855104..1855446 (+) 343 Protein_1819 hypothetical protein -
  DJ572_RS09445 (DJ572_09425) dinR/lexA 1855733..1856350 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  DJ572_RS09450 (DJ572_09430) yneA 1856500..1856817 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  DJ572_RS09455 (DJ572_09435) dinL 1856836..1857489 (+) 654 WP_015383764.1 recombinase family protein -
  DJ572_RS09460 (DJ572_09440) ynzC 1857553..1857786 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  DJ572_RS09465 (DJ572_09445) recP/tkt 1857955..1859958 (+) 2004 WP_119899453.1 transketolase Machinery gene
  DJ572_RS09470 (DJ572_09450) sirA 1860111..1860557 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  DJ572_RS09475 (DJ572_09455) yneF 1860643..1860861 (+) 219 WP_003221221.1 YneF family protein -
  DJ572_RS09480 (DJ572_09460) ynzD 1860935..1861108 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=253371 DJ572_RS09445 WP_003238209.1 1855733..1856350(-) (dinR/lexA) [Bacillus subtilis strain QB61]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=253371 DJ572_RS09445 WP_003238209.1 1855733..1856350(-) (dinR/lexA) [Bacillus subtilis strain QB61]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1