Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CSE15_RS11455 | Genome accession | NZ_CP024204 |
| Coordinates | 2215110..2215445 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain P-10 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2210110..2220445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSE15_RS11435 (CSE15_11475) | gcvT | 2210586..2211683 (-) | 1098 | WP_041091751.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CSE15_RS11440 (CSE15_11480) | - | 2212245..2213915 (+) | 1671 | WP_008342199.1 | DEAD/DEAH box helicase | - |
| CSE15_RS11445 (CSE15_11485) | - | 2213930..2214727 (+) | 798 | WP_017367588.1 | YqhG family protein | - |
| CSE15_RS11450 (CSE15_11490) | - | 2214912..2215076 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| CSE15_RS11455 (CSE15_11495) | sinR | 2215110..2215445 (+) | 336 | WP_017357978.1 | transcriptional regulator SinR | Regulator |
| CSE15_RS11460 (CSE15_11500) | tasA | 2215513..2216313 (-) | 801 | WP_008342195.1 | biofilm matrix protein TasA | - |
| CSE15_RS11465 (CSE15_11505) | sipW | 2216372..2216944 (-) | 573 | WP_017357979.1 | signal peptidase I SipW | - |
| CSE15_RS11470 (CSE15_11510) | tapA | 2216995..2217522 (-) | 528 | WP_099496603.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CSE15_RS11475 (CSE15_11515) | - | 2217775..2218101 (+) | 327 | WP_039166025.1 | DUF3889 domain-containing protein | - |
| CSE15_RS11480 (CSE15_11520) | - | 2218136..2218330 (-) | 195 | WP_008342191.1 | YqzE family protein | - |
| CSE15_RS11485 (CSE15_11525) | - | 2218391..2218774 (-) | 384 | WP_041091746.1 | competence type IV pilus minor pilin ComGG | - |
| CSE15_RS11490 (CSE15_11530) | comGF | 2218771..2219268 (-) | 498 | WP_041091745.1 | competence type IV pilus minor pilin ComGF | - |
| CSE15_RS11495 (CSE15_11535) | comGE | 2219210..2219524 (-) | 315 | WP_017357984.1 | competence type IV pilus minor pilin ComGE | - |
| CSE15_RS11500 (CSE15_11540) | comGD | 2219508..2219954 (-) | 447 | WP_017357985.1 | competence type IV pilus minor pilin ComGD | - |
| CSE15_RS11505 (CSE15_11545) | comGC | 2219947..2220240 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=252975 CSE15_RS11455 WP_017357978.1 2215110..2215445(+) (sinR) [Bacillus altitudinis strain P-10]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=252975 CSE15_RS11455 WP_017357978.1 2215110..2215445(+) (sinR) [Bacillus altitudinis strain P-10]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |