Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   CSE15_RS05710 Genome accession   NZ_CP024204
Coordinates   1120324..1121289 (+) Length   321 a.a.
NCBI ID   WP_008348509.1    Uniprot ID   A0A9X0FWP2
Organism   Bacillus altitudinis strain P-10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1115324..1126289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSE15_RS05680 (CSE15_05700) argF 1115647..1116597 (+) 951 WP_017360177.1 ornithine carbamoyltransferase -
  CSE15_RS05685 (CSE15_05705) - 1116701..1116880 (+) 180 WP_008348517.1 YjzC family protein -
  CSE15_RS05690 (CSE15_05710) - 1117050..1118315 (+) 1266 WP_007499050.1 MFS transporter -
  CSE15_RS05695 (CSE15_05715) - 1118435..1118629 (-) 195 WP_008348514.1 YjzD family protein -
  CSE15_RS05700 (CSE15_05720) - 1118842..1119582 (+) 741 WP_007499048.1 hypothetical protein -
  CSE15_RS05705 (CSE15_05725) - 1119658..1120233 (+) 576 WP_017360175.1 hypothetical protein -
  CSE15_RS05710 (CSE15_05730) med 1120324..1121289 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  CSE15_RS05715 (CSE15_05735) comZ 1121301..1121498 (+) 198 WP_017367008.1 ComZ family protein Regulator
  CSE15_RS05720 (CSE15_05740) - 1121509..1121742 (-) 234 WP_008348506.1 hypothetical protein -
  CSE15_RS05725 (CSE15_05745) - 1121912..1122850 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  CSE15_RS05730 (CSE15_05750) fabF 1122872..1124113 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  CSE15_RS05735 (CSE15_05755) - 1124191..1124985 (+) 795 WP_017367009.1 DUF2268 domain-containing protein -
  CSE15_RS05740 (CSE15_05760) - 1125156..1126136 (+) 981 WP_017367010.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 321 a.a.        Molecular weight: 35902.89 Da        Isoelectric Point: 5.9297

>NTDB_id=252955 CSE15_RS05710 WP_008348509.1 1120324..1121289(+) (med) [Bacillus altitudinis strain P-10]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=252955 CSE15_RS05710 WP_008348509.1 1120324..1121289(+) (med) [Bacillus altitudinis strain P-10]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGATGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTCCAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAACTGCCAAATGAA
AAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632


Multiple sequence alignment