Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   CS376_RS05890 Genome accession   NZ_CP024203
Coordinates   1131228..1132181 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus velezensis strain NKG-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1126228..1137181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS376_RS05860 argF 1128047..1129018 (+) 972 WP_076423875.1 ornithine carbamoyltransferase -
  CS376_RS05865 - 1129094..1129273 (+) 180 WP_003155070.1 YjzC family protein -
  CS376_RS05870 - 1129310..1129495 (-) 186 WP_007409129.1 YjzD family protein -
  CS376_RS05880 - 1129755..1130489 (+) 735 WP_052827254.1 hypothetical protein -
  CS376_RS05885 - 1130572..1131138 (+) 567 WP_099566551.1 hypothetical protein -
  CS376_RS05890 med 1131228..1132181 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  CS376_RS05895 comZ 1132194..1132385 (+) 192 WP_003155061.1 ComZ family protein Regulator
  CS376_RS05900 - 1132414..1132632 (-) 219 WP_099566552.1 hypothetical protein -
  CS376_RS05905 - 1132799..1133737 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CS376_RS05910 fabF 1133760..1134998 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  CS376_RS05915 - 1135082..1135867 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  CS376_RS05920 - 1136041..1137027 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=252889 CS376_RS05890 WP_007409125.1 1131228..1132181(+) (med) [Bacillus velezensis strain NKG-1]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=252889 CS376_RS05890 WP_007409125.1 1131228..1132181(+) (med) [Bacillus velezensis strain NKG-1]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment