Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   B9S64_RS14200 Genome accession   NZ_CP029342
Coordinates   3200997..3202121 (+) Length   374 a.a.
NCBI ID   WP_028442179.1    Uniprot ID   A0A6N9U1H4
Organism   Streptomyces sp. SM18     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3195997..3207121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9S64_RS14185 (B9S64_14185) - 3196543..3197382 (+) 840 WP_103490515.1 hypothetical protein -
  B9S64_RS14190 (B9S64_14190) - 3197473..3199368 (-) 1896 WP_109492053.1 hypothetical protein -
  B9S64_RS14195 (B9S64_14195) radA/sms 3199504..3200916 (+) 1413 WP_103488682.1 DNA repair protein RadA Machinery gene
  B9S64_RS14200 (B9S64_14200) disA 3200997..3202121 (+) 1125 WP_028442179.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  B9S64_RS14205 (B9S64_14205) - 3202314..3203147 (-) 834 WP_258037675.1 hypothetical protein -
  B9S64_RS14210 (B9S64_14210) - 3203409..3204311 (+) 903 WP_093530867.1 A/G-specific adenine glycosylase -
  B9S64_RS14215 (B9S64_14215) - 3204511..3205122 (+) 612 WP_103488681.1 SigE family RNA polymerase sigma factor -
  B9S64_RS14220 (B9S64_14220) - 3205110..3205838 (+) 729 WP_103488680.1 hypothetical protein -
  B9S64_RS14225 (B9S64_14225) cseB 3205849..3206562 (+) 714 WP_103488679.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40141.94 Da        Isoelectric Point: 4.8024

>NTDB_id=252847 B9S64_RS14200 WP_028442179.1 3200997..3202121(+) (disA) [Streptomyces sp. SM18]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDAGIPTEETGTRHRTADRVSKACGFPVVSVSQSMHLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLALQLDELIA
GVDPERELVVRDYVPEPTAKRSRTVAEALDELDTLTHTELLELPVAARALGYSGSPESLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=252847 B9S64_RS14200 WP_028442179.1 3200997..3202121(+) (disA) [Streptomyces sp. SM18]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCCGGAACGGCCCTCCGTGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGCCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCCATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCGGCATCCCCACCGAGGAGACGGGCACCCGTCACCGCACGGCCGACCGCGTCTCCAAGGCGTGCGGGTTCCCCG
TCGTCTCGGTGTCCCAGTCGATGCACCTGATCGCGCTCTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGCGCCAACCAGGCACTCGCCACGCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTCGCCCAGCGCCTGGAGATGGTGCGGCTGATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGAGTGGACCCGGAACGCGAGCTGGTCGTCCGCGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGCACGGTGGCGGA
GGCGCTGGACGAGCTGGACACGCTCACCCACACCGAGCTGCTGGAACTCCCCGTGGCGGCACGCGCCTTGGGCTACAGCG
GGTCGCCGGAGTCGCTGGACTCGGCGGTGTCACCGAGGGGTTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGAGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTCCAGGCGGTCGA
CGGGGTCGGCGAGGCCCGCGCGCGCAGCGTGCGGGAGGGACTCTCGCGCCTGGCGGAGTCGTCGATCCTCGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N9U1H4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433