Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   DG474_RS07315 Genome accession   NZ_CP029257
Coordinates   1493302..1493979 (-) Length   225 a.a.
NCBI ID   WP_000548982.1    Uniprot ID   A0A0F2DH74
Organism   Streptococcus oralis strain CCUG 53468     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1488302..1498979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DG474_RS07295 (DG474_07420) thrS 1488451..1490394 (+) 1944 WP_255777892.1 threonine--tRNA ligase -
  DG474_RS07300 (DG474_07425) - 1490546..1491595 (-) 1050 WP_125391097.1 DUF389 domain-containing protein -
  DG474_RS07305 (DG474_07430) - 1491925..1492174 (-) 250 Protein_1387 hypothetical protein -
  DG474_RS07310 (DG474_07435) - 1492335..1493309 (-) 975 WP_125391096.1 sensor histidine kinase -
  DG474_RS07315 (DG474_07440) braR 1493302..1493979 (-) 678 WP_000548982.1 response regulator transcription factor Regulator
  DG474_RS07320 (DG474_07445) - 1494306..1494869 (+) 564 WP_185761457.1 TetR/AcrR family transcriptional regulator -
  DG474_RS07325 (DG474_07450) - 1494955..1495731 (+) 777 WP_255777894.1 ferredoxin reductase -
  DG474_RS07330 (DG474_07455) - 1495843..1496919 (+) 1077 WP_255777897.1 DUF2974 domain-containing protein -

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 25892.03 Da        Isoelectric Point: 4.9898

>NTDB_id=252546 DG474_RS07315 WP_000548982.1 1493302..1493979(-) (braR) [Streptococcus oralis strain CCUG 53468]
MHKILLVEDDQVIRQQVGKLLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGEVLSLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=252546 DG474_RS07315 WP_000548982.1 1493302..1493979(-) (braR) [Streptococcus oralis strain CCUG 53468]
ATGCACAAGATTTTACTAGTAGAAGATGACCAAGTTATTCGGCAACAAGTTGGGAAACTGCTCTCTGAGTGGGGTTTTGA
GGTCGTTTTGGTAGAAGATTTTATGGAAGTATTGAGCCTTTTTGTCCAGTCAGAACCTCATTTGGTCCTCATGGATATTG
GCCTGCCACTCTTTAATGGTTACCACTGGTGCCAGGAAATTCGTAAGATTTCCAAGGTACCTATCATGTTTCTGTCTTCG
AGAGATCAGGCTATGGATATCGTCATGGCAATCAATATGGGAGCGGATGACTTTGTAACTAAGCCTTTTGACCAGCAGGT
CCTCCTTGCTAAGGTTCAGGGCTTGTTGCGCCGTTCCTATGAGTTTGGGCGGGATGAAAGTTTGCTAGAGTATGCAGGTG
TAATCCTCAATACCAAGTCTATGGACCTGCACTATCAGGGGGAGGTCCTGAGTTTGACCAAGAATGAATTTCAAATTTTG
CGAGTGCTGTTTGAACATGCTGGCAATATCGTGGCGCGTGATGACTTGATGCGGGAACTCTGGAATAGCGACTTTTTCAT
CGATGACAATACCTTGTCTGTCAATGTTGCTCGCTTGCGTAAAAAGTTGGAGGAGCAAGGTTTAGTAGGCTTTATCGAAA
CCAAGAAAGGGATAGGATACGGACTGAAACATGCTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0F2DH74

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471

  vicR Streptococcus mutans UA159

35.319

100

0.369