Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   CG477_RS05540 Genome accession   NZ_CP024113
Coordinates   1081598..1082272 (+) Length   224 a.a.
NCBI ID   WP_011983993.1    Uniprot ID   A7GM82
Organism   Bacillus cytotoxicus strain CH_3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1076598..1087272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG477_RS05515 (CG477_005525) - 1077559..1079196 (+) 1638 WP_011983990.1 peptide ABC transporter substrate-binding protein -
  CG477_RS05520 (CG477_005530) - 1079249..1079452 (-) 204 WP_011983991.1 hypothetical protein -
  CG477_RS05530 (CG477_005545) spx 1080038..1080433 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  CG477_RS05535 (CG477_005550) - 1080516..1081190 (-) 675 WP_011983992.1 TerC family protein -
  CG477_RS05540 (CG477_005555) mecA 1081598..1082272 (+) 675 WP_011983993.1 adaptor protein MecA Regulator
  CG477_RS05545 (CG477_005560) cls 1082373..1083917 (+) 1545 WP_087094616.1 cardiolipin synthase -
  CG477_RS05550 (CG477_005565) - 1084009..1085211 (+) 1203 WP_109090165.1 competence protein CoiA -
  CG477_RS05555 (CG477_005570) pepF 1085304..1087130 (+) 1827 WP_011983996.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26744.89 Da        Isoelectric Point: 4.0439

>NTDB_id=252151 CG477_RS05540 WP_011983993.1 1081598..1082272(+) (mecA) [Bacillus cytotoxicus strain CH_3]
MDIERINDHTMKFFITYVDIEDRGFNREEIWYNRERSEQLFWEMMDEARDYDDFFIDGPLWIQVQALDKGIEVLVTKAQL
SKDGQKLELPIGLDKIIDIPLDESIESLFQQELEEEGTVTNFNEDGTLGFLIKFEDFEDVISLSHRLIFEDIKDQLYSFE
NRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKEIMSEHALETIRKHFPSKT

Nucleotide


Download         Length: 675 bp        

>NTDB_id=252151 CG477_RS05540 WP_011983993.1 1081598..1082272(+) (mecA) [Bacillus cytotoxicus strain CH_3]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTCATTACGTACGTTGATATAGAGGATAGAGGATTTAATCG
CGAAGAAATTTGGTATAATCGCGAGCGAAGTGAACAATTATTTTGGGAAATGATGGATGAAGCACGTGATTACGATGACT
TCTTTATTGATGGACCATTGTGGATTCAAGTACAAGCGTTAGACAAAGGGATTGAAGTGCTTGTAACGAAAGCACAGCTT
TCAAAAGATGGACAAAAATTAGAATTACCGATAGGTCTCGATAAAATTATTGATATTCCTCTAGATGAAAGCATTGAATC
GTTATTTCAACAAGAATTAGAGGAAGAAGGAACGGTTACGAATTTTAATGAAGATGGAACACTTGGATTTTTAATTAAGT
TTGAAGATTTTGAAGATGTTATTTCATTAAGTCATCGCCTAATTTTTGAAGATATAAAAGACCAACTATATTCATTTGAA
AATCGTTATTATGTATATGTTGAATTCGATGAAGTGCTACACGATGAGGAAGAAATTGACCGTATTTTAAGTATTATTTT
AGAATACGGAGAGGAATCTACTTTAACGATTCACCGTGTGAGTGAGTATGGGAAAGAGATTATGAGCGAACATGCACTTG
AGACAATTCGTAAGCATTTTCCTTCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7GM82

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

59.91

99.107

0.594


Multiple sequence alignment