Detailed information    

insolico Bioinformatically predicted

Overview


Name   HI0659   Type   Machinery gene
Locus tag   DEH83_RS07205 Genome accession   NZ_CP029207
Coordinates   1404232..1404525 (+) Length   97 a.a.
NCBI ID   WP_150890982.1    Uniprot ID   A0A6G4MY30
Organism   Streptococcus constellatus strain TCV107     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1399232..1409525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS07160 (DEH83_07170) - 1399296..1400123 (+) 828 WP_255776480.1 ATP-binding protein -
  DEH83_RS07165 (DEH83_07175) - 1400424..1400915 (+) 492 WP_255776481.1 hypothetical protein -
  DEH83_RS07170 - 1401235..1401411 (+) 177 WP_006267997.1 hypothetical protein -
  DEH83_RS07175 (DEH83_07180) - 1401491..1402123 (+) 633 WP_255776482.1 hypothetical protein -
  DEH83_RS07180 (DEH83_07185) - 1402124..1402603 (+) 480 WP_255776483.1 hypothetical protein -
  DEH83_RS07185 (DEH83_07190) - 1402584..1402994 (+) 411 WP_255776484.1 hypothetical protein -
  DEH83_RS07190 (DEH83_07195) - 1403277..1403456 (+) 180 WP_255776485.1 hypothetical protein -
  DEH83_RS07195 (DEH83_07200) - 1403536..1403811 (+) 276 WP_255776486.1 terminase small subunit -
  DEH83_RS07200 (DEH83_07205) - 1403877..1404242 (+) 366 WP_006268450.1 type II toxin-antitoxin system RelE/ParE family toxin -
  DEH83_RS07205 (DEH83_07210) HI0659 1404232..1404525 (+) 294 WP_150890982.1 helix-turn-helix domain-containing protein Machinery gene
  DEH83_RS07210 (DEH83_07215) - 1404617..1405162 (+) 546 WP_255776487.1 hypothetical protein -
  DEH83_RS07215 (DEH83_07220) pbp2b 1405511..1407577 (+) 2067 WP_255776488.1 penicillin-binding protein PBP2B -
  DEH83_RS07220 (DEH83_07225) recR 1407588..1408184 (+) 597 WP_039677306.1 recombination mediator RecR Machinery gene
  DEH83_RS07225 (DEH83_07230) - 1408315..1409361 (+) 1047 WP_049481403.1 D-alanine--D-alanine ligase -

Sequence


Protein


Download         Length: 97 a.a.        Molecular weight: 10811.48 Da        Isoelectric Point: 4.9123

>NTDB_id=252148 DEH83_RS07205 WP_150890982.1 1404232..1404525(+) (HI0659) [Streptococcus constellatus strain TCV107]
MKNSAIGSNWKDVRAELFSKEEILESDMRVAIMSELIEARNERGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLDKTLAVVPLEREQV

Nucleotide


Download         Length: 294 bp        

>NTDB_id=252148 DEH83_RS07205 WP_150890982.1 1404232..1404525(+) (HI0659) [Streptococcus constellatus strain TCV107]
ATGAAAAATAGTGCAATTGGTAGTAACTGGAAAGATGTAAGAGCTGAGTTATTCAGCAAAGAAGAAATTTTAGAAAGTGA
TATGCGCGTGGCTATCATGAGTGAGCTTATCGAGGCTAGGAATGAAAGGGGCATTAGTCAAAAAAAACTAGAGGAACTGA
GTGGCGTTAGTCAGCCAGTCATAGCTAGAATGGAGACAGGAAAAACAAGCCCACAGCTTGATACAGTATTAAAGGTTTTG
GCAAGTCTTGATAAGACTTTAGCAGTTGTACCACTAGAGCGTGAACAAGTCTAG

Domains


Predicted by InterProScan.

(37-88)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G4MY30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.242

93.814

0.546


Multiple sequence alignment