Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CG477_RS05415 | Genome accession | NZ_CP024113 |
| Coordinates | 1058348..1060948 (+) | Length | 866 a.a. |
| NCBI ID | WP_011983974.1 | Uniprot ID | A7GM62 |
| Organism | Bacillus cytotoxicus strain CH_3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1053348..1065948
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG477_RS05380 (CG477_005395) | prsA | 1054180..1055037 (-) | 858 | WP_011983967.1 | peptidylprolyl isomerase PrsA | - |
| CG477_RS05385 (CG477_005400) | - | 1055163..1055294 (-) | 132 | WP_011983968.1 | DUF3941 domain-containing protein | - |
| CG477_RS05390 (CG477_005405) | - | 1055398..1056255 (+) | 858 | WP_087094607.1 | YitT family protein | - |
| CG477_RS05395 (CG477_005410) | - | 1056280..1056477 (-) | 198 | WP_011983970.1 | DUF3813 domain-containing protein | - |
| CG477_RS05400 (CG477_005415) | - | 1056478..1056618 (-) | 141 | WP_011983971.1 | hypothetical protein | - |
| CG477_RS05405 (CG477_005420) | - | 1056719..1057528 (-) | 810 | WP_011983972.1 | Cof-type HAD-IIB family hydrolase | - |
| CG477_RS05410 (CG477_005430) | - | 1058010..1058189 (+) | 180 | WP_041809524.1 | YjzC family protein | - |
| CG477_RS05415 (CG477_005435) | clpC | 1058348..1060948 (+) | 2601 | WP_011983974.1 | ATP-dependent chaperone ClpB | Regulator |
| CG477_RS05420 (CG477_005440) | - | 1060979..1061161 (-) | 183 | WP_011983975.1 | YjzD family protein | - |
| CG477_RS05425 (CG477_005445) | - | 1061318..1062052 (+) | 735 | WP_087094609.1 | alpha/beta hydrolase | - |
| CG477_RS05430 (CG477_005450) | - | 1062111..1062953 (+) | 843 | WP_087094610.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CG477_RS05435 (CG477_005455) | comZ | 1063013..1063186 (+) | 174 | WP_011983978.1 | ComZ family protein | Regulator |
| CG477_RS05440 (CG477_005460) | - | 1063377..1064309 (+) | 933 | WP_087094611.1 | beta-ketoacyl-ACP synthase III | - |
| CG477_RS05445 (CG477_005465) | fabF | 1064340..1065578 (+) | 1239 | WP_087094612.1 | beta-ketoacyl-ACP synthase II | - |
Sequence
Protein
Download Length: 866 a.a. Molecular weight: 97645.90 Da Isoelectric Point: 5.2823
>NTDB_id=252147 CG477_RS05415 WP_011983974.1 1058348..1060948(+) (clpC) [Bacillus cytotoxicus strain CH_3]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
Nucleotide
Download Length: 2601 bp
>NTDB_id=252147 CG477_RS05415 WP_011983974.1 1058348..1060948(+) (clpC) [Bacillus cytotoxicus strain CH_3]
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCCAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCCAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.771 |
100 |
0.483 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.46 |
100 |
0.406 |