Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG480_RS09175 | Genome accession | NZ_CP024107 |
| Coordinates | 1748873..1749196 (+) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_15 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1743873..1754196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG480_RS09160 (CG480_009125) | - | 1744344..1745708 (-) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
| CG480_RS09165 (CG480_009130) | - | 1745915..1748302 (-) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG480_RS09170 (CG480_009135) | - | 1748664..1748795 (+) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG480_RS09175 (CG480_009140) | sinR | 1748873..1749196 (+) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG480_RS09180 (CG480_009145) | calY | 1749275..1749868 (-) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG480_RS09185 (CG480_009150) | - | 1750099..1750785 (-) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG480_RS09190 (CG480_009155) | - | 1750876..1751466 (-) | 591 | WP_011984079.1 | TasA family protein | - |
| CG480_RS09195 (CG480_009160) | sipW | 1751512..1752087 (-) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG480_RS09200 (CG480_009165) | - | 1752219..1753490 (-) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG480_RS09205 (CG480_009170) | - | 1753648..1753855 (-) | 208 | Protein_1757 | hypothetical protein | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=252004 CG480_RS09175 WP_011984082.1 1748873..1749196(+) (sinR) [Bacillus cytotoxicus strain CH_15]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=252004 CG480_RS09175 WP_011984082.1 1748873..1749196(+) (sinR) [Bacillus cytotoxicus strain CH_15]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |