Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   BS636_RS08785 Genome accession   NZ_CP024011
Coordinates   1839955..1844475 (+) Length   1506 a.a.
NCBI ID   WP_099338413.1    Uniprot ID   A0A2D1IQ21
Organism   Acinetobacter sp. LoGeW2-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1834955..1849475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS636_RS08760 (BS636_08760) - 1835379..1836008 (-) 630 WP_228206948.1 hypothetical protein -
  BS636_RS08765 (BS636_08765) pilG 1836346..1836729 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  BS636_RS08770 (BS636_08770) - 1836759..1837127 (+) 369 WP_099338410.1 response regulator -
  BS636_RS08775 (BS636_08775) - 1837133..1837669 (+) 537 WP_099338411.1 chemotaxis protein CheW -
  BS636_RS08780 (BS636_08780) - 1837715..1839787 (+) 2073 WP_099338412.1 methyl-accepting chemotaxis protein -
  BS636_RS08785 (BS636_08785) chpA 1839955..1844475 (+) 4521 WP_099338413.1 Hpt domain-containing protein Regulator
  BS636_RS08790 (BS636_08790) - 1844479..1844940 (+) 462 WP_099338414.1 hypothetical protein -
  BS636_RS08795 (BS636_08795) dapE 1845004..1846140 (-) 1137 WP_099338415.1 succinyl-diaminopimelate desuccinylase -
  BS636_RS08800 (BS636_08800) - 1846263..1846412 (-) 150 WP_099338416.1 entericidin A/B family lipoprotein -
  BS636_RS08805 (BS636_08805) - 1846551..1847399 (-) 849 WP_099338417.1 DUF1853 family protein -
  BS636_RS08810 (BS636_08810) - 1847488..1847883 (+) 396 WP_099338418.1 YbaN family protein -
  BS636_RS08815 (BS636_08815) elsL 1847888..1848394 (+) 507 WP_099338419.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1506 a.a.        Molecular weight: 167884.72 Da        Isoelectric Point: 4.2496

>NTDB_id=251148 BS636_RS08785 WP_099338413.1 1839955..1844475(+) (chpA) [Acinetobacter sp. LoGeW2-3]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALLPQWFTTPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSITLTPVIQKFAQATLNIYQYVLYPCFKQVQPLTVDLRPVVLLGQQLQQQLSPEPALEELLQL
ADNLTAEGQLTGLEIADTVEADATVTEITANTETDLTVQVDAVEEQRTDLEETVAIFIEEAEEHLATIHEFLKHENNAKQ
DYNGLIRALHTLRGSSSMAQIEEICEASVKVENLFKTLVQDEIASTSRETALLQQYSEFIGDYLHLLKQGKTEKLAAISA
TFEDVWNAYGFTSSEEHDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPAYIEALSQQAAELMAHTDNRASIGIHE
FASQLKSAYDALLTRPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFTTDEAVEP
VASAPVESTGSIAVDFTSLSQRIAADHQQQNSEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTNSLNNLMR
YLHTLKGGANMITASHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAINILQNIQ
SLVAGTASTVPVAVAETIEEPTLSIGVEQEIVEDASESAEFIAESQELEQVDILEAESIPVSDEQFQEDPAVETLTVKPT
ESTLSEEDDLKSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESSFE
QFAVHHFNSNVYDSLLQKTLKWLAQAIFERDYSGFEQIKAALDAIEFVDVTAQLPERLTKTESLEITTGFEFVQGDGTEP
PNMLGEWAENTTSDNSNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQI
IAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFD
RMLPRLQRIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQ
GTDVIISFSDDGKGINAENIRAKAISLGLITAEQHVDSEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHV
SVSSELGKGTTFTIRVPTTVAVSDALMVKAGDQQFAVSLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFV
SNQPIPRLNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKSIGKQFANVGVVAGATILGDGQVCLILDGQNIARQ
VQATQRIKQVSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRM
DGFEVTNLVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=251148 BS636_RS08785 WP_099338413.1 1839955..1844475(+) (chpA) [Acinetobacter sp. LoGeW2-3]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACGACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATGCTTTATTGCCACAGTGGTTTACCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTTCATACCTTGAAAGGTTCGGGGCGTATGGTTGGTGCGAAGCAGGCA
GGCGAAATCGCCTGGGCAGTTGAGGATACTTTGAACCGTGTACTTTCCGGTTCAATCACTTTAACGCCAGTCATTCAAAA
GTTTGCTCAAGCAACTTTAAATATCTATCAATATGTACTGTATCCATGCTTTAAACAGGTACAGCCATTAACCGTGGATT
TACGTCCAGTTGTTCTTTTGGGGCAACAATTACAACAGCAATTGAGTCCAGAGCCAGCACTTGAAGAACTGTTGCAACTT
GCAGACAACCTGACTGCTGAAGGTCAGCTGACAGGTCTGGAAATTGCAGATACTGTAGAAGCAGATGCAACAGTTACAGA
GATTACTGCCAACACAGAAACTGATCTCACTGTTCAAGTGGATGCAGTTGAAGAACAGCGTACAGATCTTGAAGAAACAG
TCGCAATCTTTATTGAAGAAGCCGAAGAACATCTTGCAACGATCCATGAATTCCTGAAACACGAAAATAATGCCAAACAA
GACTATAATGGCCTGATTCGTGCGCTGCATACCTTACGTGGTAGTTCATCTATGGCACAGATTGAAGAGATCTGTGAAGC
CAGCGTCAAAGTAGAAAATTTATTTAAGACGCTTGTGCAGGATGAAATTGCTTCAACTTCAAGGGAAACAGCACTATTAC
AGCAATATTCAGAATTCATCGGCGATTATTTGCATCTGCTGAAGCAGGGTAAAACTGAAAAGCTGGCAGCGATTTCTGCC
ACTTTTGAAGATGTCTGGAATGCTTATGGCTTTACCTCGTCTGAAGAGCATGATGCTGATCAATCTCAAGGTATGGTTAC
ACGTCTAGTTGAACTGAATATCGACCAGTTACTGGATGCTGAGTTTGAGTTTGATAAGCGTGTACTTGAGGAATATCCAG
CCTATATCGAAGCTTTAAGCCAGCAGGCTGCAGAGCTGATGGCACATACCGATAACCGTGCTTCAATTGGTATCCATGAA
TTCGCCTCTCAATTGAAATCAGCTTATGATGCATTGCTGACAAGACCAGTGCTGCTTGAAAGCGATTATGCTTTTGAACT
TTTTGCCCAGGCACATCAGGAATTCATTCACCTGTTTGATACCCTGGCTGCGGGTCAACGCGTTATTCTGAATGCCGAAG
TTGAAAAACTTCTAGCAGATCTGTCTGCCTTCGTGCAGCAAGATATTGAGGTATTCACTACAGATGAAGCAGTTGAGCCT
GTTGCTTCTGCACCAGTCGAGTCAACTGGCTCTATAGCTGTGGATTTTACAAGTCTCAGCCAGCGTATTGCAGCTGACCA
TCAGCAGCAAAATTCTGAAGATGCTAACCGTGACTTTGATGAAGACTTGCTGGATATCTTCTTGGAAGAAGCAGATGAGT
TACTGGCAGGGATTGATGAAGACCTGAACACCTGGTCCAAAGAGCCTGAAAATACCAATTCTTTAAATAATCTGATGCGT
TATTTGCATACCCTGAAGGGTGGTGCAAATATGATTACCGCCTCGCATATCGGTTCGATTGCGCATGAGCTGGAAAGCAT
TTATGAACGCGTGATCCGTCAACAGATAACCGTAACGCCAGCTTTAATCCAGATCATCCGACTGGTACAGGATAACGTGT
CTGATCGTATTCAAAGTATTCGTGATGACAAGATCGATTACCCGGCACCTGAAGCAATCAACATCCTGCAAAACATTCAG
TCGCTTGTTGCCGGCACAGCTAGCACGGTTCCGGTTGCTGTGGCTGAAACAATAGAAGAACCAACATTATCTATAGGTGT
TGAGCAAGAAATTGTTGAAGATGCATCTGAATCTGCTGAGTTCATTGCTGAATCTCAAGAGCTTGAGCAGGTAGATATTC
TTGAAGCTGAATCTATCCCTGTGTCAGATGAGCAGTTCCAAGAAGATCCAGCTGTTGAAACACTTACTGTTAAGCCAACT
GAATCTACGCTTTCTGAAGAAGATGATCTGAAATCCATTGTTGAAGAAACTTTCCTAGAAGAATCACAAGAGATTCTGGA
AAATGCAGAAAAATTACTGAACCAATGGTTCGACCAACGTAGTGACCGTAGCTTATTACTACAACTTCAGCGTGCTGCCC
ACAGTATCAAGGGTGGCGCCCGCATGATCAGCAATGAAAGCATTGCAAGCATTGCTTATGGTTTAGAAAGCTCATTCGAA
CAGTTTGCGGTTCATCACTTTAACTCTAATGTCTATGACAGCTTGCTGCAAAAGACATTAAAGTGGCTGGCACAAGCCAT
CTTTGAGCGTGATTACAGCGGTTTTGAACAAATCAAAGCAGCGTTGGATGCAATTGAGTTTGTCGATGTCACTGCGCAAT
TGCCTGAGCGTCTGACCAAAACTGAAAGTCTGGAAATTACAACTGGATTCGAGTTTGTTCAGGGTGATGGTACTGAGCCA
CCGAACATGCTGGGTGAATGGGCTGAAAACACCACCAGCGATAACAGCAACGAGATGATCCGAATCTCAGCTGACCTGGT
TGAGAAGATGATTGACTTGTCGGGCGAGAACGCGATTAACCGTTCGCGTATCGAGATGGATCTGGGTCAGCTTGGCAACA
CATTGAACGAGATGGAGCTGGCGATCAAACGTCTGGCTGATCAGCTGCGTCGAATGGAAGGCGAGCTGGAATCTCAGATT
ATTGCTAAGCATGGTTCTGAGAACTCACGCTATGCTGACTTTGACCCATTGGAGATGGACCAATATTCATCCCTGAATCA
GTTGTCGAAATCTCTTGCCGAATCTGCATCGGACTTAGTGGACTTTAAGACCACACTGGCAGAGAAAATCCGTGATACCG
AAGGTTTGTTATTGCAACAATCACGTATTCAAGCAGAGATCCAAGAAAGCTTGATGCGTACCCGTCTGGTTCCGTTTGAT
CGTATGTTGCCGCGTTTACAACGTATCGTGCGTCAAACCTCAACAACGTTAAACCGTCCAGCGGAACTGATTGTTCAGAA
TACAGAAGGCGAACTGGATCGTACCATTCTGGAACGTCTGGTCAATCCATTCGAGCACATGCTGCGTAACGCGATTGACC
ATGGTCTGGAAGATACTGCGGAACGCCTTGCGCTGAATAAACCGGAAGTCGGTTCAATTGTCTTAAACATCAGCCGTCAG
GGTACGGATGTCATTATCTCCTTCAGTGATGATGGTAAGGGGATTAATGCCGAAAATATTCGTGCTAAAGCAATTAGTCT
AGGCTTGATCACAGCGGAACAACATGTAGATTCAGAAGAACTGCTGCAGTTTATTTTCCATCCAGGGTTCAGTACGGCGA
AAGCAGTCACCCAGATTTCTGGTCGTGGTGTTGGTCTGGACGTGGTGCAAAGCGAAATTAAAACACTGGGCGGTCACGTA
TCGGTAAGTTCTGAACTGGGCAAAGGCACGACCTTTACCATTCGCGTACCGACCACAGTAGCAGTCAGTGATGCCTTGAT
GGTGAAAGCGGGCGATCAGCAATTTGCTGTTTCCTTGGCGCAAATTGATCGTATTGTCCGTATTGCACCAGCAACTCTAG
AAACTTACTTCAACAGTAAGGATGACTACTTCAAGATTGATGGCGTGAACTACAAACTACGTTATCTGTCTGAGTTTGTA
TCGAATCAGCCAATTCCACGCTTGAATAACGTCGCGCATTCTTTACCAGTCCTGCTCATTAAGGGTAATGGTGGTCAAAG
TATTGCGTTACTTGTTGATCAATTAGTGGGTTCACGTGCCCAAATTGTCGTGAAATCAATTGGTAAGCAGTTTGCCAATG
TGGGTGTTGTGGCAGGGGCAACCATCCTCGGTGATGGTCAGGTTTGTCTGATTCTGGATGGACAGAATATTGCCCGTCAG
GTTCAGGCGACTCAGCGTATCAAACAGGTATCTGATCAACAGGATCTGTCACGTCGTGGTAATGCACGCCGTCTGGTGAT
GATTGTCGATGACTCCGTAACTGTACGTAAGGTAACGTCGCGTCTGCTAGAACGTCAGGGTTATGACATTGTCACTGCCA
AAGATGGTGTTGATGCAATTGAACAGCTAGAAAATGTCCGTCCAGACCTGATGCTGCTAGATATCGAAATGCCACGTATG
GATGGTTTCGAAGTGACCAACCTGGTTCGTCACCACGATATTCATCGCAACTTACCGATTATCATGATTACCTCACGTAC
GGGTGAGAAGCATCGTGAACGTGCCTTCAGCCTTGGCGTAACGCACTATATGGGCAAACCGTTCCAGGAAGCGGAACTGC
TTGCCAATGTTCAAGAATTAATTGCTGCTCAACAGGGGTAA

Domains

Predicted by InterproScan.

Hpt domain (Hpt)

(736-800)

Hpt domain (Hpt)

(522-608)

Hpt domain (Hpt)

(213-286)

Hpt domain (Hpt)

(25-103)

CheW-like domain (CheW)

(1225-1361)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1083-1218)

Response regulator receiver domain (Response_reg)

(1386-1497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.079

100

0.61

Multiple sequence alignment