Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CRN80_RS10850 Genome accession   NZ_CP023969
Coordinates   2304378..2304785 (+) Length   135 a.a.
NCBI ID   WP_014720321.1    Uniprot ID   A0A0R3C615
Organism   Pseudomonas sp. FDAARGOS_380     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2299378..2309785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CRN80_RS10825 (CRN80_10825) pyrR 2300368..2300874 (-) 507 WP_056783033.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CRN80_RS10830 (CRN80_10830) ruvX 2301023..2301460 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  CRN80_RS10835 (CRN80_10835) - 2301460..2302029 (-) 570 WP_032894725.1 YqgE/AlgH family protein -
  CRN80_RS10840 (CRN80_10840) - 2302203..2303108 (-) 906 WP_098950126.1 energy transducer TonB -
  CRN80_RS10845 (CRN80_10845) gshB 2303186..2304139 (-) 954 WP_003195061.1 glutathione synthase -
  CRN80_RS10850 (CRN80_10850) pilG 2304378..2304785 (+) 408 WP_014720321.1 twitching motility response regulator PilG Regulator
  CRN80_RS10855 (CRN80_10855) pilH 2304832..2305197 (+) 366 WP_014720320.1 twitching motility response regulator PilH -
  CRN80_RS10860 (CRN80_10860) - 2305209..2305733 (+) 525 WP_098950127.1 chemotaxis protein CheW -
  CRN80_RS10865 (CRN80_10865) - 2305730..2307781 (+) 2052 WP_098950128.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14924.48 Da        Isoelectric Point: 7.3841

>NTDB_id=251010 CRN80_RS10850 WP_014720321.1 2304378..2304785(+) (pilG) [Pseudomonas sp. FDAARGOS_380]
MEQHSNALKVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=251010 CRN80_RS10850 WP_014720321.1 2304378..2304785(+) (pilG) [Pseudomonas sp. FDAARGOS_380]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAGACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCCCGTATTGTCGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAA
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGGGCGATCAAGGCCTATGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0R3C615

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

92.593

0.667
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment