Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CRN29_RS03245 | Genome accession | NZ_CP023966 |
| Coordinates | 674738..675133 (+) | Length | 131 a.a. |
| NCBI ID | WP_023351359.1 | Uniprot ID | A0A7X9WCS4 |
| Organism | Staphylococcus capitis strain FDAARGOS_378 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 669738..680133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN29_RS03215 (CRN29_03215) | atpD | 669956..671368 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| CRN29_RS03220 (CRN29_03220) | - | 671388..671792 (+) | 405 | WP_002435826.1 | F0F1 ATP synthase subunit epsilon | - |
| CRN29_RS03225 (CRN29_03225) | - | 671933..672166 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| CRN29_RS03230 (CRN29_03230) | murA | 672276..673541 (+) | 1266 | WP_002435807.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CRN29_RS03235 (CRN29_03235) | fabZ | 673586..674023 (+) | 438 | WP_023351358.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CRN29_RS03240 (CRN29_03240) | - | 674104..674547 (-) | 444 | WP_002435823.1 | YwpF-like family protein | - |
| CRN29_RS03245 (CRN29_03245) | ssb | 674738..675133 (+) | 396 | WP_023351359.1 | single-stranded DNA-binding protein | Machinery gene |
| CRN29_RS03250 (CRN29_03250) | - | 675528..676253 (+) | 726 | WP_023351360.1 | transglycosylase family protein | - |
| CRN29_RS03255 (CRN29_03255) | tenA | 676549..677238 (+) | 690 | WP_002435801.1 | thiaminase II | - |
| CRN29_RS03260 (CRN29_03260) | thiD | 677231..678052 (+) | 822 | WP_002435497.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CRN29_RS03265 (CRN29_03265) | thiM | 678045..678833 (+) | 789 | WP_023351361.1 | hydroxyethylthiazole kinase | - |
| CRN29_RS03270 (CRN29_03270) | thiE | 678840..679478 (+) | 639 | WP_023351362.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15172.04 Da Isoelectric Point: 5.2691
>NTDB_id=250951 CRN29_RS03245 WP_023351359.1 674738..675133(+) (ssb) [Staphylococcus capitis strain FDAARGOS_378]
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDNKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=250951 CRN29_RS03245 WP_023351359.1 674738..675133(+) (ssb) [Staphylococcus capitis strain FDAARGOS_378]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAATAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |