Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | DDT09_RS00145 | Genome accession | NZ_CP029070 |
| Coordinates | 30084..30680 (+) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens strain ALB69 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 25084..35680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDT09_RS00120 (DDT09_00120) | - | 26431..26943 (-) | 513 | WP_044803089.1 | isochorismatase family cysteine hydrolase | - |
| DDT09_RS00125 (DDT09_00125) | tadA | 27065..27547 (+) | 483 | WP_061861755.1 | tRNA adenosine(34) deaminase TadA | - |
| DDT09_RS00135 (DDT09_00135) | dnaX | 28030..29721 (+) | 1692 | WP_003150701.1 | DNA polymerase III subunit gamma/tau | - |
| DDT09_RS00140 (DDT09_00140) | - | 29746..30069 (+) | 324 | WP_003150700.1 | YbaB/EbfC family nucleoid-associated protein | - |
| DDT09_RS00145 (DDT09_00145) | recR | 30084..30680 (+) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| DDT09_RS00150 (DDT09_00150) | - | 30699..30923 (+) | 225 | WP_007408755.1 | YaaL family protein | - |
| DDT09_RS00155 (DDT09_00155) | - | 30984..31247 (+) | 264 | WP_003150686.1 | pro-sigmaK processing inhibitor BofA family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=250175 DDT09_RS00145 WP_003150697.1 30084..30680(+) (recR) [Bacillus amyloliquefaciens strain ALB69]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=250175 DDT09_RS00145 WP_003150697.1 30084..30680(+) (recR) [Bacillus amyloliquefaciens strain ALB69]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATAACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGAAGGGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATAACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGAAGGGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |