Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   BAALB65_RS09090 Genome accession   NZ_CP029069
Coordinates   1765753..1767627 (+) Length   624 a.a.
NCBI ID   WP_014417807.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1760753..1772627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS09075 (BAALB65_09075) ymcA 1761804..1762235 (+) 432 WP_109566943.1 RicAFT regulatory complex protein RicA family protein Regulator
  BAALB65_RS09080 (BAALB65_09080) cotE 1762488..1763033 (+) 546 WP_003154111.1 outer spore coat protein CotE -
  BAALB65_RS09085 (BAALB65_09085) hexA 1763152..1765737 (+) 2586 WP_031303980.1 DNA mismatch repair protein MutS Machinery gene
  BAALB65_RS09090 (BAALB65_09090) hexB 1765753..1767627 (+) 1875 WP_014417807.1 DNA mismatch repair endonuclease MutL Machinery gene
  BAALB65_RS20445 (BAALB65_09095) - 1767701..1767987 (+) 287 Protein_1722 tyrosine-type recombinase/integrase -
  BAALB65_RS09100 (BAALB65_09100) - 1768524..1769189 (+) 666 WP_109566944.1 hypothetical protein -
  BAALB65_RS09105 (BAALB65_09105) - 1769303..1769932 (+) 630 WP_162532061.1 SLATT domain-containing protein -
  BAALB65_RS20450 (BAALB65_09110) - 1770067..1770411 (+) 345 Protein_1725 HNH endonuclease signature motif containing protein -
  BAALB65_RS09115 (BAALB65_09115) - 1770606..1770890 (-) 285 WP_014417811.1 hypothetical protein -
  BAALB65_RS09120 (BAALB65_09120) - 1770896..1771414 (-) 519 WP_109566946.1 hypothetical protein -
  BAALB65_RS09125 (BAALB65_09125) - 1771697..1771906 (-) 210 WP_029973446.1 hypothetical protein -

Sequence

Protein


Download         Length: 624 a.a.        Molecular weight: 70144.35 Da        Isoelectric Point: 5.9381

>NTDB_id=250092 BAALB65_RS09090 WP_014417807.1 1765753..1767627(+) (hexB) [Bacillus amyloliquefaciens strain ALB65]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIDIEEAGLSSIRVLDNGEGMETDDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEIKTSIGEGAGTHLILQGGNIISEQKSSSRKGTEIIVTNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHQGKNLLQTNGNGDVRHVLAAIYGTAVAKKMIPLHVSSLDFEVKGYIALPE
ITRASRNYMSSVINGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHELIRDG
IKEVFQKQRLIPSAQLPKKSAPAPAKNEQQFMTFEESAPERKLPEKTPEPSYSPMKLSSVVKEPEPVIIEEEILPNEADH
EVPPELGMAETAAPVSDTPEPEAVSEEIREERVPVMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGQVE
PEVQDMIVPLTFHYAANEALIIDQHQHELESVGVFLEAFGTNSYIVRCHPAWFPKGEEAELIEEIIQQVLDAKQIDIKKL
REEAAIMMSCKGSIKANRHLRNDEIKALLDDLRRTTDPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1875 bp        

>NTDB_id=250092 BAALB65_RS09090 WP_014417807.1 1765753..1767627(+) (hexB) [Bacillus amyloliquefaciens strain ALB65]
TTGGCAAAAGTCATCCAGCTCTCAGATGAACTTTCAAATAAAATAGCGGCCGGCGAGGTAGTCGAACGGCCTGCCTCAGT
CGTTAAAGAATTGGTGGAAAACGCCATCGACGCAAACAGTACAGTCATTGAAATCGACATAGAGGAAGCGGGGCTTTCGT
CGATTCGGGTGCTCGATAACGGCGAAGGGATGGAAACCGATGATTGCAAGCGGGCTTTCCGCCGCCACGCGACCAGTAAA
ATCAAAGATGAAAACGACCTGTTCCGGGTGAGAACACTCGGTTTCCGCGGAGAAGCTTTGCCAAGTATCGCGTCTGTTTC
TCATCTGGAAATCAAAACGAGCATCGGCGAGGGAGCGGGCACCCATCTCATTCTTCAGGGCGGGAATATCATTTCTGAAC
AGAAATCCTCCAGCAGAAAAGGAACGGAGATTATCGTTACCAACCTGTTTTTCAATACACCCGCCAGATTGAAATATATG
AAAACCGTGCATACGGAGCTCGGCAATATTACGGATGTTGTTAACCGGATCGCTCTTGCGCATCCGGAAGTATCGATCCG
TCTCCGTCATCAGGGGAAAAATCTGCTGCAGACAAACGGTAACGGGGACGTGCGCCATGTGCTGGCCGCAATTTACGGGA
CGGCGGTTGCGAAAAAAATGATACCGCTCCATGTCAGCTCGCTTGATTTTGAAGTCAAGGGCTACATTGCGCTTCCGGAA
ATCACGCGTGCATCCAGAAACTACATGTCATCTGTCATTAACGGAAGATACATTAAGAATTTCCCGCTTGTAAAAGCGGT
GCATGAGGGCTATCACACACTTCTGCCGATCGGCCGCCATCCGATTACGTTTATCGAAATTACGATGGACCCGATTTTGG
TCGATGTCAATGTACATCCCTCAAAGCTTGAAGTCCGCCTCAGCAAAGAGACGGAGCTGCATGAGCTGATCCGTGACGGG
ATAAAGGAAGTGTTTCAAAAGCAGCGGCTTATTCCGAGCGCCCAGCTCCCGAAAAAATCAGCGCCGGCACCGGCCAAAAA
CGAACAGCAATTTATGACATTCGAGGAAAGCGCGCCTGAGCGGAAACTTCCTGAAAAAACGCCGGAGCCGTCTTACTCAC
CAATGAAGCTGAGTTCGGTCGTAAAAGAGCCTGAGCCGGTAATAATAGAAGAAGAGATTCTCCCGAATGAAGCGGATCAC
GAAGTGCCGCCGGAGCTCGGCATGGCGGAAACGGCAGCGCCTGTTTCCGATACTCCGGAACCGGAAGCTGTCTCTGAAGA
AATACGGGAAGAAAGAGTTCCGGTGATGTATCCGATCGGCCAAATGCACGGGACATATATTTTAGCCCAAAACGAAAACG
GCTTGTATATCATTGACCAGCATGCGGCACAAGAACGGATTAAATACGAATATTTCCGGGAGAAAGTCGGGCAGGTCGAG
CCTGAAGTACAGGACATGATCGTGCCGCTCACCTTTCATTACGCGGCAAACGAAGCGCTGATCATTGACCAGCATCAGCA
TGAGCTTGAAAGTGTCGGAGTATTTTTAGAAGCATTCGGCACGAACAGCTACATCGTCCGCTGCCATCCGGCCTGGTTTC
CAAAAGGGGAAGAAGCTGAACTGATTGAAGAAATCATTCAGCAGGTGCTTGACGCCAAGCAGATCGATATTAAGAAACTG
CGGGAGGAAGCGGCCATTATGATGAGCTGCAAAGGCTCAATCAAAGCGAACCGCCATTTGCGAAACGACGAAATCAAAGC
GCTCTTGGACGACCTGCGCCGAACGACAGACCCGTTCACATGCCCGCACGGCCGGCCGATCATTATCCACCACAGCACGT
ATGAGATGGAGAAGATGTTTAAGCGTGTGATGTAG

Domains

Predicted by InterProScan.

MutL C terminal dimerisation domain (MutL_C)

(439-580)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-111)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-325)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

46.512

100

0.481

Multiple sequence alignment