Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BAALB65_RS01350 Genome accession   NZ_CP029069
Coordinates   217934..218143 (+) Length   69 a.a.
NCBI ID   WP_021494575.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 212934..223143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS01315 (BAALB65_01315) - 213503..214135 (-) 633 WP_069013551.1 DUF6338 family protein -
  BAALB65_RS20160 - 214328..214486 (+) 159 WP_162532055.1 hypothetical protein -
  BAALB65_RS01320 (BAALB65_01320) - 214729..214959 (+) 231 WP_069013552.1 helix-turn-helix domain-containing protein -
  BAALB65_RS01325 (BAALB65_01325) - 215054..215389 (-) 336 WP_069013553.1 hypothetical protein -
  BAALB65_RS01330 (BAALB65_01330) - 215455..216000 (+) 546 WP_162532057.1 hypothetical protein -
  BAALB65_RS01335 (BAALB65_01335) rapC 216115..217242 (+) 1128 WP_069013555.1 Rap family tetratricopeptide repeat protein Regulator
  BAALB65_RS01340 (BAALB65_01340) - 217418..217606 (-) 189 WP_069013556.1 hypothetical protein -
  BAALB65_RS01345 (BAALB65_01345) - 217714..217941 (+) 228 WP_069013557.1 hypothetical protein -
  BAALB65_RS01350 (BAALB65_01350) dinR/lexA 217934..218143 (+) 210 WP_021494575.1 hypothetical protein Regulator

Sequence

Protein


Download         Length: 69 a.a.        Molecular weight: 8014.22 Da        Isoelectric Point: 10.2182

>NTDB_id=250026 BAALB65_RS01350 WP_021494575.1 217934..218143(+) (dinR/lexA) [Bacillus amyloliquefaciens strain ALB65]
MRNLTKRQEDALNAISNFLNQYGVAPTHRELMEELGLRSTSSVKGLLDRLREKNYVTWQEGLPRTIKLL

Nucleotide


Download         Length: 210 bp        

>NTDB_id=250026 BAALB65_RS01350 WP_021494575.1 217934..218143(+) (dinR/lexA) [Bacillus amyloliquefaciens strain ALB65]
ATGCGTAATCTTACAAAAAGGCAAGAAGATGCTTTAAACGCGATATCGAATTTCTTAAATCAGTATGGAGTGGCCCCGAC
ACATCGGGAGTTAATGGAGGAACTTGGTTTGCGGTCCACCAGTTCAGTGAAGGGGCTGCTAGATAGGTTAAGAGAAAAGA
ATTACGTAACATGGCAAGAAGGATTACCGCGGACAATTAAATTATTATAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

39.13

100

0.391