Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DDG67_RS08410 | Genome accession | NZ_CP029031 |
| Coordinates | 1654036..1654335 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CIT | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1649036..1659335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDG67_RS08385 | gcvPA | 1650248..1651594 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| DDG67_RS08390 | gcvT | 1651614..1652705 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DDG67_RS08395 | - | 1652864..1653388 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| DDG67_RS08400 | - | 1653378..1653524 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| DDG67_RS08405 | comGF | 1653621..1654118 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DDG67_RS08410 | comGE | 1654036..1654335 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| DDG67_RS08415 | comGD | 1654322..1654768 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DDG67_RS08420 | comGC | 1654746..1655057 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DDG67_RS08425 | comGB | 1655071..1656141 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DDG67_RS08430 | comGA | 1656113..1657087 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DDG67_RS08435 | - | 1657139..1657762 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DDG67_RS08440 | - | 1657759..1658088 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DDG67_RS08445 | - | 1658088..1659074 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| DDG67_RS08450 | - | 1659071..1659274 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=249716 DDG67_RS08410 WP_000844413.1 1654036..1654335(-) (comGE) [Staphylococcus aureus strain CIT]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=249716 DDG67_RS08410 WP_000844413.1 1654036..1654335(-) (comGE) [Staphylococcus aureus strain CIT]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |