Detailed information NTG0249659

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CQJ38_RS01915
• Genome accession: NZ_CP023748
• Coordinates: 381373..382521 (+)
• Length: 382 a.a.
• NCBI ID: WP_098080978.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LABIM40
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 376373..387521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CQJ38_RS01895 (CQJ38_01895)	-	376770..377453 (-)	684	WP_098080976.1	ABC transporter ATP-binding protein	-
CQJ38_RS01900 (CQJ38_01900)	-	377468..378904 (-)	1437	WP_098080977.1	ABC transporter permease	-
CQJ38_RS01905 (CQJ38_01905)	-	379117..379800 (+)	684	WP_063096183.1	response regulator transcription factor	-
CQJ38_RS01910 (CQJ38_01910)	-	379787..381220 (+)	1434	WP_162992601.1	sensor histidine kinase	-
CQJ38_RS01915 (CQJ38_01915)	rapC	381373..382521 (+)	1149	WP_098080978.1	Rap family tetratricopeptide repeat protein	Regulator
CQJ38_RS01920 (CQJ38_01920)	phrC	382505..382624 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
CQJ38_RS01925 (CQJ38_01925)	-	382773..382883 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
CQJ38_RS01930 (CQJ38_01930)	-	382963..384327 (-)	1365	WP_080130839.1	aspartate kinase	-
CQJ38_RS01935 (CQJ38_01935)	ceuB	384741..385694 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
CQJ38_RS01940 (CQJ38_01940)	-	385684..386631 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
CQJ38_RS01945 (CQJ38_01945)	-	386625..387383 (+)	759	WP_063096189.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45535.74 Da
• Isoelectric Point: 4.9916

>NTDB_id=249659 CQJ38_RS01915 WP_098080978.1 381373..382521(+) (rapC) [Bacillus velezensis strain LABIM40]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNYFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=249659 CQJ38_RS01915 WP_098080978.1 381373..382521(+) (rapC) [Bacillus velezensis strain LABIM40]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTATTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTACTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568