Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CQJ30_RS12205 | Genome accession | NZ_CP023704 |
| Coordinates | 2474842..2475141 (+) | Length | 99 a.a. |
| NCBI ID | WP_108898280.1 | Uniprot ID | - |
| Organism | Caldibacillus thermoamylovorans strain SSBM | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2469842..2480141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQJ30_RS12175 (CQJ30_12140) | - | 2470207..2471010 (+) | 804 | WP_108898278.1 | YqhG family protein | - |
| CQJ30_RS12180 (CQJ30_12145) | - | 2471189..2471359 (-) | 171 | WP_034770998.1 | DUF2759 domain-containing protein | - |
| CQJ30_RS12185 (CQJ30_12150) | - | 2471430..2471672 (-) | 243 | WP_034771001.1 | DUF2626 domain-containing protein | - |
| CQJ30_RS12190 (CQJ30_12155) | - | 2471812..2472513 (-) | 702 | WP_034771004.1 | helix-turn-helix domain-containing protein | - |
| CQJ30_RS12195 (CQJ30_12160) | comGA | 2472724..2473809 (+) | 1086 | WP_034771006.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CQJ30_RS12200 (CQJ30_12165) | comGB | 2473784..2474815 (+) | 1032 | WP_161522412.1 | competence type IV pilus assembly protein ComGB | - |
| CQJ30_RS12205 (CQJ30_12170) | comGC | 2474842..2475141 (+) | 300 | WP_108898280.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CQJ30_RS12210 (CQJ30_12175) | comGD | 2475092..2475619 (+) | 528 | WP_108898281.1 | competence type IV pilus minor pilin ComGD | - |
| CQJ30_RS12215 (CQJ30_12180) | - | 2475594..2475950 (+) | 357 | WP_108898282.1 | hypothetical protein | - |
| CQJ30_RS12220 (CQJ30_12185) | comGF | 2475922..2476386 (+) | 465 | WP_041846279.1 | competence type IV pilus minor pilin ComGF | - |
| CQJ30_RS12225 (CQJ30_12190) | comGG | 2476277..2476807 (+) | 531 | WP_081912341.1 | competence type IV pilus minor pilin ComGG | - |
| CQJ30_RS12230 (CQJ30_12195) | - | 2476909..2477094 (+) | 186 | WP_161522413.1 | YqzE family protein | - |
| CQJ30_RS12235 (CQJ30_12200) | - | 2477125..2478249 (-) | 1125 | WP_108898284.1 | hypothetical protein | - |
| CQJ30_RS12240 (CQJ30_12205) | - | 2478417..2479604 (-) | 1188 | WP_108898285.1 | M14 family metallopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11011.92 Da Isoelectric Point: 5.0890
>NTDB_id=249400 CQJ30_RS12205 WP_108898280.1 2474842..2475141(+) (comGC) [Caldibacillus thermoamylovorans strain SSBM]
MLKKESGFTLIEMMIVLFVITILLLITIPNVTKHQTSISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
MLKKESGFTLIEMMIVLFVITILLLITIPNVTKHQTSISNKGCEGLENMVQAEIQAYQIDHNKLPASIDDLKNGYLKEEP
VCPDGRKIVISNGDAVIKE
Nucleotide
Download Length: 300 bp
>NTDB_id=249400 CQJ30_RS12205 WP_108898280.1 2474842..2475141(+) (comGC) [Caldibacillus thermoamylovorans strain SSBM]
ATGTTGAAAAAAGAATCTGGATTTACGTTAATCGAGATGATGATCGTTCTTTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGACAAGTATCAGCAATAAGGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGTTATTTGAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGATGCAGTTATCAAAGAGTGA
ATGTTGAAAAAAGAATCTGGATTTACGTTAATCGAGATGATGATCGTTCTTTTCGTCATCACTATTTTACTGCTTATAAC
CATTCCAAACGTGACAAAACACCAGACAAGTATCAGCAATAAGGGCTGTGAAGGATTAGAAAATATGGTTCAGGCAGAAA
TCCAAGCCTATCAAATAGATCATAATAAATTACCTGCTTCTATTGATGACTTGAAAAACGGTTATTTGAAAGAAGAACCG
GTATGTCCGGATGGAAGGAAGATTGTTATCTCTAATGGTGATGCAGTTATCAAAGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
54.737 |
95.96 |
0.525 |
| comGC | Staphylococcus aureus MW2 |
45.918 |
98.99 |
0.455 |
| comGC | Staphylococcus aureus N315 |
45.918 |
98.99 |
0.455 |