Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   CP942_RS09770 Genome accession   NZ_CP023666
Coordinates   2016448..2016846 (+) Length   132 a.a.
NCBI ID   WP_023855672.1    Uniprot ID   A0AAW6KF42
Organism   Bacillus paralicheniformis strain Bac48     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2011448..2021846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS09755 - 2013556..2014296 (+) 741 WP_101561647.1 ribonuclease YeeF family protein -
  CP942_RS09760 - 2014702..2015505 (-) 804 WP_105979335.1 serine/threonine protein kinase -
  CP942_RS22520 - 2015511..2015681 (-) 171 WP_023855671.1 hypothetical protein -
  CP942_RS09765 nucA/comI 2015984..2016430 (+) 447 WP_020450096.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  CP942_RS09770 nin/comJ 2016448..2016846 (+) 399 WP_023855672.1 competence protein ComJ Regulator
  CP942_RS09775 - 2016886..2018322 (-) 1437 WP_105979336.1 glycoside hydrolase family 1 protein -
  CP942_RS09780 - 2018392..2019117 (-) 726 WP_020450093.1 AAA family ATPase -
  CP942_RS09785 - 2019213..2019764 (-) 552 WP_105979337.1 NAD(P)H-dependent oxidoreductase -
  CP942_RS09790 - 2019948..2020823 (+) 876 WP_105979338.1 transporter substrate-binding domain-containing protein -
  CP942_RS09795 - 2020835..2021518 (+) 684 WP_105979339.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14928.99 Da        Isoelectric Point: 5.1700

>NTDB_id=249101 CP942_RS09770 WP_023855672.1 2016448..2016846(+) (nin/comJ) [Bacillus paralicheniformis strain Bac48]
MIKKWEAEEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTAGEHAVSFEALDNTASLVEVRLNVQEQVPSFNRRVTVSF
DVLHGGVEIASVLSKKLSCDIPQGVYQLTCYTIMPDQSSTAKITYILDFKQA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=249101 CP942_RS09770 WP_023855672.1 2016448..2016846(+) (nin/comJ) [Bacillus paralicheniformis strain Bac48]
TTGATCAAAAAGTGGGAAGCAGAAGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAAAAAGGCGGAAAGCCGCC
CGTTATGGATTGGACAGACGAGGATATTAAAAGAGGCTACACAGCGGGAGAACACGCGGTCTCGTTTGAAGCTCTCGATA
ATACGGCATCATTAGTAGAAGTTCGTTTGAATGTCCAGGAACAGGTTCCCTCCTTTAACAGGCGCGTCACCGTTTCTTTC
GACGTGCTTCATGGCGGGGTCGAAATTGCAAGCGTCCTATCCAAGAAATTGTCATGCGACATCCCGCAAGGCGTCTATCA
GCTGACATGCTATACGATTATGCCTGATCAAAGCAGCACTGCGAAGATCACCTATATTCTCGATTTTAAACAGGCCTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

51.562

96.97

0.5

Multiple sequence alignment