Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   CP942_RS05245 Genome accession   NZ_CP023666
Coordinates   1037857..1038810 (-) Length   317 a.a.
NCBI ID   WP_020450927.1    Uniprot ID   A0A6N2FML9
Organism   Bacillus paralicheniformis strain Bac48     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032857..1043810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS05215 - 1032959..1033933 (-) 975 WP_105979057.1 ABC transporter ATP-binding protein -
  CP942_RS05220 - 1034125..1034913 (-) 789 WP_050820915.1 DUF2268 domain-containing protein -
  CP942_RS05225 fabF 1034999..1036237 (-) 1239 WP_065643384.1 beta-ketoacyl-ACP synthase II -
  CP942_RS05230 - 1036259..1037197 (-) 939 WP_105979058.1 beta-ketoacyl-ACP synthase III -
  CP942_RS05235 - 1037366..1037608 (+) 243 WP_003180586.1 hypothetical protein -
  CP942_RS05240 comZ 1037661..1037846 (-) 186 WP_011197761.1 ComZ family protein Regulator
  CP942_RS05245 med 1037857..1038810 (-) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  CP942_RS05250 - 1038895..1039470 (-) 576 WP_003180580.1 hypothetical protein -
  CP942_RS05255 - 1039556..1040290 (-) 735 WP_039072677.1 hypothetical protein -
  CP942_RS05260 - 1040522..1040716 (+) 195 WP_009328851.1 YjzD family protein -
  CP942_RS05265 - 1040779..1040958 (-) 180 WP_003180573.1 YjzC family protein -
  CP942_RS05270 - 1041140..1041952 (+) 813 WP_065643386.1 undecaprenyl-diphosphate phosphatase -
  CP942_RS05275 argF 1041990..1042940 (-) 951 WP_035338970.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35390.09 Da        Isoelectric Point: 4.7166

>NTDB_id=249089 CP942_RS05245 WP_020450927.1 1037857..1038810(-) (med) [Bacillus paralicheniformis strain Bac48]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=249089 CP942_RS05245 WP_020450927.1 1037857..1038810(-) (med) [Bacillus paralicheniformis strain Bac48]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATTTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N2FML9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675

Multiple sequence alignment