Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CP942_RS05240 Genome accession   NZ_CP023666
Coordinates   1037661..1037846 (-) Length   61 a.a.
NCBI ID   WP_011197761.1    Uniprot ID   A0A6I7TNH1
Organism   Bacillus paralicheniformis strain Bac48     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032661..1042846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS05215 - 1032959..1033933 (-) 975 WP_105979057.1 ABC transporter ATP-binding protein -
  CP942_RS05220 - 1034125..1034913 (-) 789 WP_050820915.1 DUF2268 domain-containing protein -
  CP942_RS05225 fabF 1034999..1036237 (-) 1239 WP_065643384.1 beta-ketoacyl-ACP synthase II -
  CP942_RS05230 - 1036259..1037197 (-) 939 WP_105979058.1 beta-ketoacyl-ACP synthase III -
  CP942_RS05235 - 1037366..1037608 (+) 243 WP_003180586.1 hypothetical protein -
  CP942_RS05240 comZ 1037661..1037846 (-) 186 WP_011197761.1 ComZ family protein Regulator
  CP942_RS05245 med 1037857..1038810 (-) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  CP942_RS05250 - 1038895..1039470 (-) 576 WP_003180580.1 hypothetical protein -
  CP942_RS05255 - 1039556..1040290 (-) 735 WP_039072677.1 hypothetical protein -
  CP942_RS05260 - 1040522..1040716 (+) 195 WP_009328851.1 YjzD family protein -
  CP942_RS05265 - 1040779..1040958 (-) 180 WP_003180573.1 YjzC family protein -
  CP942_RS05270 - 1041140..1041952 (+) 813 WP_065643386.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6842.96 Da        Isoelectric Point: 4.2564

>NTDB_id=249088 CP942_RS05240 WP_011197761.1 1037661..1037846(-) (comZ) [Bacillus paralicheniformis strain Bac48]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=249088 CP942_RS05240 WP_011197761.1 1037661..1037846(-) (comZ) [Bacillus paralicheniformis strain Bac48]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAGTACGTTCCGGAAGCGAAAGCAGAGATGGAGAAAGCGGG
AATCGAACTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCCGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TNH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.333

98.361

0.721

Multiple sequence alignment