Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CPC18_RS01175 Genome accession   NZ_CP023561
Coordinates   222669..223334 (-) Length   221 a.a.
NCBI ID   WP_148121211.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TF3198     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 217669..228334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPC18_RS01155 (CPC18_01155) - 218139..218252 (-) 114 WP_011447078.1 hypothetical protein -
  CPC18_RS01160 (CPC18_01160) - 218911..220911 (-) 2001 WP_000776751.1 ABC transporter permease -
  CPC18_RS01165 (CPC18_01165) - 220908..221663 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  CPC18_RS01170 (CPC18_01170) braS 221771..222658 (-) 888 WP_148121210.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CPC18_RS01175 (CPC18_01175) braR 222669..223334 (-) 666 WP_148121211.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CPC18_RS01180 (CPC18_01180) - 223360..223560 (-) 201 WP_000604732.1 hypothetical protein -
  CPC18_RS01185 (CPC18_01185) - 223758..225182 (+) 1425 WP_000953744.1 alkaline phosphatase -
  CPC18_RS14855 (CPC18_01190) - 225242..225343 (-) 102 WP_000731972.1 SE2200 family small protein -
  CPC18_RS01195 (CPC18_01195) - 225465..225920 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CPC18_RS01200 (CPC18_01200) - 226165..226926 (-) 762 WP_000323455.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25366.37 Da        Isoelectric Point: 4.6846

>NTDB_id=248404 CPC18_RS01175 WP_148121211.1 222669..223334(-) (braR) [Staphylococcus aureus strain TF3198]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINSPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=248404 CPC18_RS01175 WP_148121211.1 222669..223334(-) (braR) [Staphylococcus aureus strain TF3198]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
CGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment