Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   CPC18_RS01170 Genome accession   NZ_CP023561
Coordinates   221771..222658 (-) Length   295 a.a.
NCBI ID   WP_148121210.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TF3198     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 216771..227658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPC18_RS01135 (CPC18_01135) - 216790..216882 (+) 93 WP_010956583.1 hypothetical protein -
  CPC18_RS01140 (CPC18_01140) - 216990..217487 (-) 498 WP_001065268.1 glutathione peroxidase -
  CPC18_RS01145 (CPC18_01145) - 217497..217757 (-) 261 WP_001789910.1 hypothetical protein -
  CPC18_RS01155 (CPC18_01155) - 218139..218252 (-) 114 WP_011447078.1 hypothetical protein -
  CPC18_RS01160 (CPC18_01160) - 218911..220911 (-) 2001 WP_000776751.1 ABC transporter permease -
  CPC18_RS01165 (CPC18_01165) - 220908..221663 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  CPC18_RS01170 (CPC18_01170) braS 221771..222658 (-) 888 WP_148121210.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CPC18_RS01175 (CPC18_01175) braR 222669..223334 (-) 666 WP_148121211.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CPC18_RS01180 (CPC18_01180) - 223360..223560 (-) 201 WP_000604732.1 hypothetical protein -
  CPC18_RS01185 (CPC18_01185) - 223758..225182 (+) 1425 WP_000953744.1 alkaline phosphatase -
  CPC18_RS14855 (CPC18_01190) - 225242..225343 (-) 102 WP_000731972.1 SE2200 family small protein -
  CPC18_RS01195 (CPC18_01195) - 225465..225920 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CPC18_RS01200 (CPC18_01200) - 226165..226926 (-) 762 WP_000323455.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34005.25 Da        Isoelectric Point: 6.0874

>NTDB_id=248403 CPC18_RS01170 WP_148121210.1 221771..222658(-) (braS) [Staphylococcus aureus strain TF3198]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLGLGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=248403 CPC18_RS01170 WP_148121210.1 221771..222658(-) (braS) [Staphylococcus aureus strain TF3198]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGGACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment