Detailed information NTG0024814

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NOC_RS05050
• Genome accession: NC_007484
• Coordinates: 1019737..1020765 (+)
• Length: 342 a.a.
• NCBI ID: WP_002809237.1
• Uniprot ID: Q3JCL0
• Organism: Nitrosococcus oceani ATCC 19707
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1014737..1025765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NOC_RS05035 (Noc_0921)	-	1018136..1018483 (-)	348	WP_002810945.1	hypothetical protein	-
NOC_RS05040 (Noc_0922)	pncC	1018635..1019123 (+)	489	WP_002811127.1	nicotinamide-nucleotide amidase	-
NOC_RS05045 (Noc_0923)	thpR	1019107..1019640 (+)	534	WP_002809436.1	RNA 2',3'-cyclic phosphodiesterase	-
NOC_RS05050 (Noc_0924)	recA	1019737..1020765 (+)	1029	WP_002809237.1	recombinase RecA	Machinery gene
NOC_RS05055 (Noc_0925)	-	1020774..1021226 (+)	453	WP_002811758.1	regulatory protein RecX	-
NOC_RS05060 (Noc_0926)	alaS	1021251..1023872 (+)	2622	WP_002809851.1	alanine--tRNA ligase	-
NOC_RS05065 (Noc_0927)	-	1023885..1025126 (+)	1242	WP_002811304.1	aspartate kinase	-
NOC_RS05070 (Noc_0928)	csrA	1025384..1025641 (+)	258	WP_002809243.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 36689.06 Da
• Isoelectric Point: 5.8345

>NTDB_id=24814 NOC_RS05050 WP_002809237.1 1019737..1020765(+) (recA) [Nitrosococcus oceani ATCC 19707]
MDENRKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEIFGPEASGKTTLALQVA
AEAQALGGTAAFVDAEHALDPQYAERLGVSVEDLLVSQPDTGEQALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGALKKGDEIVGN
ETRVKVVKNKMAPPFKQVSFDILYGSGVSREGEIIDLGVREGFIEKAGAWYSYNGERIGQGRDNVRQFLKEHRELAQGIE
AHIREKLLPGKAALEEVQEAVT

Nucleotide

• Length: 1029 bp

>NTDB_id=24814 NOC_RS05050 WP_002809237.1 1019737..1020765(+) (recA) [Nitrosococcus oceani ATCC 19707]
ATGGATGAGAACCGGAAAAAAGCGCTAGGAGCTGCCCTCTCTCAAATTGAGAAGCAGTTTGGCAAAGGCGCCGTGATGCG
TCTTGGAGATGCGAGCATTGTACGCGAGGTCGAGGTAATCTCGACGGGGTCTTTGGGGCTAGATATCGCGCTTGGGGTAG
GAGGGTTACCGCGAGGCCGCGTGGTTGAAATTTTTGGCCCAGAGGCGTCGGGTAAGACAACGTTAGCTCTGCAAGTAGCG
GCGGAAGCCCAGGCGTTGGGGGGGACGGCGGCTTTTGTGGACGCTGAACACGCCCTTGACCCCCAGTATGCCGAGCGATT
GGGCGTGAGTGTTGAGGATCTTCTGGTCTCCCAACCGGATACCGGAGAACAAGCCCTAGAAATTGCCGATATGCTGGTGC
GTTCGGGGGCAGTGGATGTGGTTGTTATAGACTCGGTGGCCGCGCTGACCCCAAAAGCGGAAATTGAGGGGGAAATGGGT
GACTCCCATGTGGGCTTGCAAGCCAGACTCATGTCCCAGGCTCTACGCAAGCTTACCGCCAATATTAAGCGTTCCAATAC
CCTGGTGATTTTTATTAATCAAATCCGAATGAAAATTGGGGTGATGTTTGGTAGTCCGGAGACAACTACTGGGGGTAATG
CGCTTAAATTTTATGCTTCTGTACGGTTGGATATTCGACGGGTGGGAGCGCTCAAAAAGGGGGACGAGATCGTTGGTAAC
GAGACGCGGGTGAAGGTGGTTAAAAACAAAATGGCGCCGCCTTTTAAACAAGTTTCCTTCGATATTCTTTATGGATCGGG
GGTCTCCCGGGAGGGGGAAATTATCGATCTAGGGGTGCGGGAAGGGTTCATTGAAAAGGCGGGCGCTTGGTATAGTTATA
ACGGTGAGCGGATTGGTCAGGGCCGGGATAATGTACGCCAGTTCCTCAAGGAACATCGGGAGCTCGCCCAAGGCATCGAA
GCCCATATCCGGGAGAAGTTATTGCCGGGCAAAGCAGCGTTAGAGGAAGTCCAGGAAGCGGTAACCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: Q3JCL0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	75	95.906	0.719
recA	Ralstonia pseudosolanacearum GMI1000	78.846	91.228	0.719
recA	Acinetobacter baumannii D1279779	72.866	95.906	0.699
recA	Acinetobacter baylyi ADP1	72.866	95.906	0.699
recA	Neisseria gonorrhoeae MS11	72.222	94.737	0.684
recA	Neisseria gonorrhoeae MS11	72.222	94.737	0.684
recA	Neisseria gonorrhoeae strain FA1090	72.222	94.737	0.684
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.341	95.906	0.684
recA	Vibrio cholerae strain A1552	71.341	95.906	0.684
recA	Glaesserella parasuis strain SC1401	68.923	95.029	0.655
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.35	96.784	0.623
recA	Bacillus subtilis subsp. subtilis str. 168	64.596	94.152	0.608
recA	Helicobacter pylori strain NCTC11637	62.5	95.906	0.599
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.5	95.906	0.599
recA	Helicobacter pylori 26695	62.195	95.906	0.596
recA	Streptococcus mutans UA159	60.736	95.322	0.579
recA	Streptococcus mitis SK321	57.434	100	0.576
recA	Streptococcus pneumoniae Rx1	59.939	95.614	0.573
recA	Streptococcus pneumoniae D39	59.939	95.614	0.573
recA	Streptococcus pneumoniae R6	59.939	95.614	0.573
recA	Streptococcus pneumoniae TIGR4	59.939	95.614	0.573
recA	Streptococcus pyogenes NZ131	59.574	96.199	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	60.559	94.152	0.57
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.633	95.614	0.57
recA	Streptococcus mitis NCTC 12261	59.259	94.737	0.561
recA	Lactococcus lactis subsp. cremoris KW2	59.259	94.737	0.561