Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CO687_RS09785 Genome accession   NZ_CP023511
Coordinates   1986663..1987466 (-) Length   267 a.a.
NCBI ID   WP_096755358.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1981663..1992466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS09770 (CO687_09770) smc 1981807..1985340 (-) 3534 WP_096755357.1 chromosome segregation protein SMC -
  CO687_RS09775 (CO687_09775) rnc 1985331..1986029 (-) 699 WP_045502139.1 ribonuclease III -
  CO687_RS09780 (CO687_09780) - 1986269..1986628 (-) 360 WP_048778539.1 YbaN family protein -
  CO687_RS09785 (CO687_09785) vicX 1986663..1987466 (-) 804 WP_096755358.1 MBL fold metallo-hydrolase Regulator
  CO687_RS09790 (CO687_09790) micB 1987459..1988820 (-) 1362 WP_008809003.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CO687_RS09795 (CO687_09795) micA 1988813..1989514 (-) 702 WP_008809004.1 response regulator YycF Regulator
  CO687_RS09800 (CO687_09800) thrS 1989720..1991663 (-) 1944 WP_012000240.1 threonine--tRNA ligase -
  CO687_RS10665 (CO687_09805) - 1991755..1992126 (-) 372 WP_045773786.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29717.67 Da        Isoelectric Point: 6.1185

>NTDB_id=247991 CO687_RS09785 WP_096755358.1 1986663..1987466(-) (vicX) [Streptococcus gordonii strain FDAARGOS_371]
MTKEGFKYSILASGSSGNCFYLETTQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDNKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=247991 CO687_RS09785 WP_096755358.1 1986663..1987466(-) (vicX) [Streptococcus gordonii strain FDAARGOS_371]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAACCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGAAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACAATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGATCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTATCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGTCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAATCGTA
CCAAAAAGATTTATCTGGGGCACTTGAGTAAAGAAAATAATATCAAGGAGCTGGCTCATATGACCATGGTTAACCAGCTA
GCTCAAGCTGACTTGGCTGTCAATCATGATTTTCAGGTTTTAGACACTTCGCCAGATACAGCTACACCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment