Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   CO684_RS03680 Genome accession   NZ_CP023500
Coordinates   688786..689772 (+) Length   328 a.a.
NCBI ID   WP_096753267.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDAARGOS_412     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 683786..694772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO684_RS03655 (CO684_03655) opp4B 683999..684961 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  CO684_RS03660 (CO684_03660) opp4C 684973..685854 (+) 882 WP_001180262.1 oligopeptide ABC transporter permease -
  CO684_RS03665 (CO684_03665) trpS 685896..686885 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  CO684_RS03670 (CO684_03670) spxA 687180..687575 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  CO684_RS03675 (CO684_03675) mecA 687946..688665 (+) 720 WP_001217730.1 adaptor protein MecA -
  CO684_RS03680 (CO684_03680) coiA 688786..689772 (+) 987 WP_096753267.1 competence protein CoiA family protein Machinery gene
  CO684_RS03685 (CO684_03685) pepF 689820..691628 (+) 1809 WP_000082731.1 oligoendopeptidase F -
  CO684_RS03690 (CO684_03690) yjbH 692088..692894 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  CO684_RS03695 (CO684_03695) - 692917..693282 (-) 366 WP_000214065.1 truncated hemoglobin YjbI -
  CO684_RS03700 (CO684_03700) - 693386..693979 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  CO684_RS03705 (CO684_03705) - 694165..694512 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38870.54 Da        Isoelectric Point: 9.7121

>NTDB_id=247740 CO684_RS03680 WP_096753267.1 688786..689772(+) (coiA) [Staphylococcus aureus strain FDAARGOS_412]
MLVALNEEKERVLTTTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDK
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=247740 CO684_RS03680 WP_096753267.1 688786..689772(+) (coiA) [Staphylococcus aureus strain FDAARGOS_412]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTATTAACAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAAA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(5-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

98.78

100

0.988
  coiA Staphylococcus aureus N315

97.561

100

0.976

Multiple sequence alignment