Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CO689_RS01730 Genome accession   NZ_CP023497
Coordinates   157025..158068 (-) Length   347 a.a.
NCBI ID   WP_002481663.1    Uniprot ID   -
Organism   Staphylococcus simulans strain FDAARGOS_383     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 152025..163068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO689_RS01700 (CO689_01700) - 153149..153355 (-) 207 WP_002481657.1 DUF1128 family protein -
  CO689_RS01705 (CO689_01705) - 153579..154043 (+) 465 WP_002481658.1 low molecular weight protein-tyrosine-phosphatase -
  CO689_RS01710 (CO689_01710) - 154051..154341 (+) 291 WP_002481659.1 hypothetical protein -
  CO689_RS01715 (CO689_01715) - 154472..155548 (+) 1077 WP_002481660.1 YihY/virulence factor BrkB family protein -
  CO689_RS01720 (CO689_01720) - 155757..156335 (+) 579 WP_002481661.1 carbonic anhydrase -
  CO689_RS01725 (CO689_01725) vraR 156406..157035 (-) 630 WP_002481662.1 response regulator transcription factor Regulator
  CO689_RS01730 (CO689_01730) vraS 157025..158068 (-) 1044 WP_002481663.1 sensor histidine kinase Regulator
  CO689_RS01735 (CO689_01735) liaF 158065..158766 (-) 702 WP_002481664.1 cell wall-active antibiotics response protein LiaF -
  CO689_RS01740 (CO689_01740) - 158782..159177 (-) 396 WP_002481665.1 hypothetical protein -
  CO689_RS01745 (CO689_01745) map 159293..160057 (-) 765 WP_002481666.1 type I methionyl aminopeptidase -
  CO689_RS01750 (CO689_01750) - 160277..161263 (+) 987 WP_002481667.1 aromatic acid exporter family protein -
  CO689_RS01755 (CO689_01755) - 161346..162065 (-) 720 WP_002481668.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39897.15 Da        Isoelectric Point: 4.8944

>NTDB_id=247705 CO689_RS01730 WP_002481663.1 157025..158068(-) (vraS) [Staphylococcus simulans strain FDAARGOS_383]
MNHYIRAIGSMLILNYSILAIFFFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILMSIIVGSVLAYKVNEQNDWIKT
QIEHSIEGEVVGINDQNIELYQETLDIYHTLVPLNQELHRLRIKTQDLTNETYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESPLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLFNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEENDGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=247705 CO689_RS01730 WP_002481663.1 157025..158068(-) (vraS) [Staphylococcus simulans strain FDAARGOS_383]
ATGAACCACTATATCAGAGCCATCGGTTCGATGCTGATATTGAACTATAGTATATTAGCGATTTTCTTTTTTATAGACAA
AGTATTCGTCAACATCATCTACTTTCAAGGAATGTTTTACACGCAGATTTTCGGCATTCCTGTTTTCTTATTTTTAAATA
TTATAGTGATTTTGATGAGTATTATTGTTGGTTCTGTGTTAGCGTATAAAGTGAACGAACAAAATGATTGGATTAAAACA
CAAATTGAACATTCCATTGAAGGGGAAGTTGTCGGTATTAATGATCAAAATATCGAACTCTACCAAGAAACTTTGGATAT
CTATCATACACTTGTGCCATTAAACCAAGAGTTACATCGACTACGTATTAAAACACAAGATTTGACCAACGAAACATATA
ATTTAAATGACGTTAAAGTGAAGAAAATTATAGAAGATGAACGCCAGCGTTTAGCTAGAGAATTGCATGATTCAGTTAGT
CAGCAATTATTTGCGGCAAGTATGATGTTATCGGCGATTAAGGAATCACCACTTGAACCGCCGCTTGATCAGCAAATTCC
GACACTAGAAAAGATGGTACAAGATTCGCAACTAGAAATGCGTGCATTGTTATTACATTTAAGACCGCTTGGCTTAAAAG
ATCGCTCACTTGGGGAAGGAATTAAAGATCTTGTTGTGGACTTACAAAAGAAAGTGCCTATGAAAGTAGTTTATGATATT
GAAGACTTTGAGGTACCAAAAGGCATAGAAGATCATTTATTCCGTATCACCCAAGAAGGGATTTCCAATACACTGCGACA
TGCAGAAGGCACAAAATTAACGATAGATTTATTTAATAAAGATGATTATCTGTTATTGCGTATTCAAGATGATGGTAAAG
GCTTTGATGTAGATGAAAAAATGGAGAAAAGCTATGGATTGAAGAATATGCGAGAGCGAGCATTAGAAATCGGGGCAACA
CTGCATATTGTTTCTTTGCCTGGGGCAGGGACAAGAATTGAAGTGAAGGCTCCATTGAATAAGGAGGAAAATGATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

86.167

100

0.862


Multiple sequence alignment