Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CO218_RS01355 Genome accession   NZ_CP023490
Coordinates   288311..289588 (-) Length   425 a.a.
NCBI ID   WP_063852593.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain NCIMB 700965     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 283311..294588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO218_RS01350 (CO218_01350) - 286562..288271 (-) 1710 WP_063852594.1 proline--tRNA ligase -
  CO218_RS01355 (CO218_01355) eeP 288311..289588 (-) 1278 WP_063852593.1 RIP metalloprotease RseP Regulator
  CO218_RS01360 (CO218_01360) - 289626..290411 (-) 786 WP_063852592.1 phosphatidate cytidylyltransferase -
  CO218_RS01365 (CO218_01365) - 290427..291206 (-) 780 WP_063852591.1 isoprenyl transferase -
  CO218_RS01370 (CO218_01370) frr 291326..291889 (-) 564 WP_003640736.1 ribosome recycling factor -
  CO218_RS01375 (CO218_01375) pyrH 291891..292613 (-) 723 WP_003640737.1 UMP kinase -
  CO218_RS01380 (CO218_01380) tsf 292813..293691 (-) 879 WP_063852590.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45865.37 Da        Isoelectric Point: 9.5613

>NTDB_id=247674 CO218_RS01355 WP_063852593.1 288311..289588(-) (eeP) [Lactiplantibacillus plantarum strain NCIMB 700965]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTRVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTIDRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLMMLLMILVTWNDVQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=247674 CO218_RS01355 WP_063852593.1 288311..289588(-) (eeP) [Lactiplantibacillus plantarum strain NCIMB 700965]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGCTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGATGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCGATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCGCGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCGACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATCTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCATGATGTTATTAATGATTCTAGTAACTTGGAATGATGTTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492
  eeP Streptococcus thermophilus LMG 18311

48.832

100

0.492

Multiple sequence alignment