Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   CMR26_RS01590 Genome accession   NZ_CP023414
Coordinates   304630..305274 (+) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain BS-37     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 299630..310274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMR26_RS01560 (CMR26_01555) - 300078..300419 (-) 342 WP_007408677.1 hypothetical protein -
  CMR26_RS01570 (CMR26_01565) degQ 300882..301022 (+) 141 WP_108724754.1 degradation enzyme regulation protein DegQ Regulator
  CMR26_RS01575 (CMR26_01570) - 301174..302085 (+) 912 WP_079891433.1 polyprenyl synthetase family protein -
  CMR26_RS01580 (CMR26_01575) comX 302085..302249 (+) 165 WP_007613432.1 competence pheromone ComX -
  CMR26_RS01585 (CMR26_01580) comP 302261..304549 (+) 2289 WP_108724755.1 histidine kinase Regulator
  CMR26_RS01590 (CMR26_01585) comA 304630..305274 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  CMR26_RS01595 (CMR26_01590) - 305296..305679 (+) 384 WP_007408674.1 hotdog fold thioesterase -
  CMR26_RS01600 (CMR26_01595) mnhG 305719..306093 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  CMR26_RS01605 (CMR26_01600) - 306077..306361 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  CMR26_RS01610 (CMR26_01605) - 306361..306837 (-) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  CMR26_RS01615 (CMR26_01610) - 306843..308330 (-) 1488 WP_108724756.1 Na+/H+ antiporter subunit D -
  CMR26_RS01620 (CMR26_01615) - 308323..308664 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  CMR26_RS01625 (CMR26_01620) - 308664..309095 (-) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=246855 CMR26_RS01590 WP_003152052.1 304630..305274(+) (comA) [Bacillus velezensis strain BS-37]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=246855 CMR26_RS01590 WP_003152052.1 304630..305274(+) (comA) [Bacillus velezensis strain BS-37]
ATGAAAAAGATACTAGTGATTGATGATCATCCAGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCTAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCACTTCACTTAAGCAAGCGGTCAATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment