Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   Bateq7PJ16_RS17430 Genome accession   NZ_CP023409
Coordinates   3221199..3223511 (-) Length   770 a.a.
NCBI ID   WP_041332996.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3216199..3228511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS17390 (Bateq7PJ16_3455) mrpB 3216664..3217095 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  Bateq7PJ16_RS17395 (Bateq7PJ16_3456) mrpC 3217095..3217436 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  Bateq7PJ16_RS17400 (Bateq7PJ16_3457) mrpD 3217429..3218910 (+) 1482 WP_046160793.1 Na+/H+ antiporter subunit D -
  Bateq7PJ16_RS17405 (Bateq7PJ16_3458) mrpE 3218916..3219392 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  Bateq7PJ16_RS17410 (Bateq7PJ16_3459) mrpF 3219392..3219676 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  Bateq7PJ16_RS17415 (Bateq7PJ16_3460) mnhG 3219660..3220034 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  Bateq7PJ16_RS17420 (Bateq7PJ16_3461) yuxO 3220075..3220455 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  Bateq7PJ16_RS17425 (Bateq7PJ16_3462) comA 3220474..3221118 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  Bateq7PJ16_RS17430 (Bateq7PJ16_3463) comP 3221199..3223511 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  Bateq7PJ16_RS17435 (Bateq7PJ16_3464) comX 3223527..3223748 (-) 222 WP_014480704.1 competence pheromone ComX -
  Bateq7PJ16_RS17440 (Bateq7PJ16_3465) - 3223750..3224613 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  Bateq7PJ16_RS17445 (Bateq7PJ16_3466) degQ 3224798..3224938 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  Bateq7PJ16_RS17450 (Bateq7PJ16_3467) - 3225160..3225285 (+) 126 WP_003228793.1 hypothetical protein -
  Bateq7PJ16_RS17455 (Bateq7PJ16_3468) - 3225400..3225768 (+) 369 WP_046381300.1 hypothetical protein -
  Bateq7PJ16_RS17460 (Bateq7PJ16_3469) pdeH 3225744..3226973 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89706.94 Da        Isoelectric Point: 8.2535

>NTDB_id=246817 Bateq7PJ16_RS17430 WP_041332996.1 3221199..3223511(-) (comP) [Bacillus subtilis strain 7PJ-16]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSCVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=246817 Bateq7PJ16_RS17430 WP_041332996.1 3221199..3223511(-) (comP) [Bacillus subtilis strain 7PJ-16]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCATGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.047

99.87

0.56


Multiple sequence alignment