Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   Bateq7PJ16_RS13570 Genome accession   NZ_CP023409
Coordinates   2514380..2515183 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2509380..2520183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS13545 (Bateq7PJ16_2684) glpQB 2510526..2511257 (-) 732 WP_049141221.1 glycerophosphodiester phosphodiesterase -
  Bateq7PJ16_RS13550 (Bateq7PJ16_2685) yqiI 2511336..2511956 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  Bateq7PJ16_RS13555 (Bateq7PJ16_2686) yqiH 2511971..2512264 (-) 294 WP_003230284.1 lipoprotein -
  Bateq7PJ16_RS13560 (Bateq7PJ16_2687) - 2512572..2512724 (+) 153 WP_014480226.1 hypothetical protein -
  Bateq7PJ16_RS13565 (Bateq7PJ16_2688) yqiG 2512797..2513915 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  Bateq7PJ16_RS13570 (Bateq7PJ16_2690) spo0A 2514380..2515183 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  Bateq7PJ16_RS13575 (Bateq7PJ16_2691) spoIVB 2515459..2516739 (-) 1281 WP_004398697.1 SpoIVB peptidase -
  Bateq7PJ16_RS13580 (Bateq7PJ16_2692) recN 2516914..2518644 (-) 1731 WP_072173936.1 DNA repair protein RecN Machinery gene
  Bateq7PJ16_RS13585 (Bateq7PJ16_2693) argR 2518681..2519130 (-) 450 WP_014114358.1 arginine repressor ArgR -
  Bateq7PJ16_RS13590 (Bateq7PJ16_2694) yqxC 2519228..2520073 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=246792 Bateq7PJ16_RS13570 WP_003226427.1 2514380..2515183(-) (spo0A) [Bacillus subtilis strain 7PJ-16]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=246792 Bateq7PJ16_RS13570 WP_003226427.1 2514380..2515183(-) (spo0A) [Bacillus subtilis strain 7PJ-16]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCAGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment