Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Bateq7PJ16_RS02425 Genome accession   NZ_CP023409
Coordinates   466845..467795 (+) Length   316 a.a.
NCBI ID   WP_159376646.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 461845..472795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS02400 (Bateq7PJ16_0447) rapC 463305..464453 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  Bateq7PJ16_RS02405 (Bateq7PJ16_0448) phrC 464437..464559 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  Bateq7PJ16_RS02410 (Bateq7PJ16_0449) yczM 464659..464748 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  Bateq7PJ16_RS02415 (Bateq7PJ16_0450) yczN 464830..464943 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  Bateq7PJ16_RS02420 (Bateq7PJ16_0451) thrD 465096..466460 (-) 1365 WP_159376645.1 aspartate kinase -
  Bateq7PJ16_RS02425 (Bateq7PJ16_0452) ceuB 466845..467795 (+) 951 WP_159376646.1 petrobactin ABC transporter permease YclN Machinery gene
  Bateq7PJ16_RS02430 (Bateq7PJ16_0453) yclO 467788..468735 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  Bateq7PJ16_RS02435 (Bateq7PJ16_0454) yclP 468729..469487 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  Bateq7PJ16_RS02440 (Bateq7PJ16_0455) yclQ 469509..470462 (+) 954 WP_159376647.1 petrobactin ABC transporter substrate-binding protein YclQ -
  Bateq7PJ16_RS02445 (Bateq7PJ16_0456) cdaE 470508..471926 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34853.24 Da        Isoelectric Point: 9.9364

>NTDB_id=246765 Bateq7PJ16_RS02425 WP_159376646.1 466845..467795(+) (ceuB) [Bacillus subtilis strain 7PJ-16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFLLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=246765 Bateq7PJ16_RS02425 WP_159376646.1 466845..467795(+) (ceuB) [Bacillus subtilis strain 7PJ-16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTCTGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment