Detailed information NTG0246036

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CLI97_RS07950
• Genome accession: NZ_CP023320
• Coordinates: 1477951..1479114 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SCGB
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1472951..1484114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLI97_RS07920 (CLI97_01566)	-	1473216..1473635 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
CLI97_RS07925 (CLI97_01567)	comFC	1473709..1474398 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
CLI97_RS07930 (CLI97_01568)	-	1474404..1474688 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
CLI97_RS07935 (CLI97_01569)	comFA	1474746..1476131 (-)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
CLI97_RS07940 (CLI97_01570)	-	1476239..1477087 (-)	849	WP_003151387.1	DegV family protein	-
CLI97_RS07945 (CLI97_01571)	degU	1477185..1477874 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
CLI97_RS07950 (CLI97_01572)	degS	1477951..1479114 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
CLI97_RS07955 (CLI97_01573)	-	1479337..1479984 (+)	648	WP_060657503.1	YigZ family protein	-
CLI97_RS07960 (CLI97_01574)	-	1479989..1481164 (+)	1176	WP_071392366.1	LCP family protein	-
CLI97_RS07965 (CLI97_01575)	-	1481254..1482330 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
CLI97_RS07970 (CLI97_01576)	-	1482463..1483659 (-)	1197	WP_094247452.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=246036 CLI97_RS07950 WP_003151385.1 1477951..1479114(-) (degS) [Bacillus velezensis strain SCGB]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=246036 CLI97_RS07950 WP_003151385.1 1477951..1479114(-) (degS) [Bacillus velezensis strain SCGB]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948