Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CLM72_RS26515 Genome accession   NZ_CP023269
Coordinates   5768074..5768481 (-) Length   135 a.a.
NCBI ID   WP_014720321.1    Uniprot ID   A0A0R3C615
Organism   Pseudomonas sp. MYb193     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5763074..5773481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLM72_RS26500 (CLM72_26325) - 5765078..5767129 (-) 2052 WP_105228849.1 methyl-accepting chemotaxis protein -
  CLM72_RS26505 (CLM72_26330) - 5767126..5767650 (-) 525 WP_105228850.1 chemotaxis protein CheW -
  CLM72_RS26510 (CLM72_26335) pilH 5767662..5768027 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  CLM72_RS26515 (CLM72_26340) pilG 5768074..5768481 (-) 408 WP_014720321.1 twitching motility response regulator PilG Regulator
  CLM72_RS26520 (CLM72_26345) gshB 5768720..5769673 (+) 954 WP_034128936.1 glutathione synthase -
  CLM72_RS26525 (CLM72_26350) - 5769751..5770656 (+) 906 WP_034128937.1 energy transducer TonB -
  CLM72_RS26530 (CLM72_26355) - 5770739..5771308 (+) 570 WP_060763957.1 YqgE/AlgH family protein -
  CLM72_RS26535 (CLM72_26360) ruvX 5771308..5771745 (+) 438 WP_105228851.1 Holliday junction resolvase RuvX -
  CLM72_RS26540 (CLM72_26365) pyrR 5771878..5772384 (+) 507 WP_019817751.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CLM72_RS26545 (CLM72_26370) - 5772409..5773413 (+) 1005 WP_034128938.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14924.48 Da        Isoelectric Point: 7.3841

>NTDB_id=245624 CLM72_RS26515 WP_014720321.1 5768074..5768481(-) (pilG) [Pseudomonas sp. MYb193]
MEQHSNALKVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=245624 CLM72_RS26515 WP_014720321.1 5768074..5768481(-) (pilG) [Pseudomonas sp. MYb193]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCCCGTATTGTCGATCATCACCCGCACA
TTATCTTCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGTTGTCTTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAATT
TTTGACCAAGCCTTTTAGCAAGGAAGAACTGCTGGGGGCGATCAAGGCCTATGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0R3C615

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

92.593

0.667
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment