Detailed information
Bioinformatically predicted
Overview
| Name | sinI | Type | Regulator |
| Locus tag | CLD04_RS12940 | Genome accession | NZ_CP023257 |
| Coordinates | 2423659..2423832 (+) | Length | 57 a.a. |
| NCBI ID | WP_003230187.1 | Uniprot ID | A0A063X7W9 |
| Organism | Bacillus subtilis strain TLO3 | ||
| Function | inhibit the expression of sinR (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2418659..2428832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLD04_RS12925 (CLD04_12925) | gcvT | 2419459..2420547 (-) | 1089 | WP_017696204.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CLD04_RS12930 (CLD04_12930) | hepAA | 2420988..2422661 (+) | 1674 | WP_017696203.1 | SNF2-related protein | - |
| CLD04_RS12935 (CLD04_12935) | yqhG | 2422682..2423476 (+) | 795 | WP_017696202.1 | YqhG family protein | - |
| CLD04_RS12940 (CLD04_12940) | sinI | 2423659..2423832 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| CLD04_RS12945 (CLD04_12945) | sinR | 2423866..2424201 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| CLD04_RS12950 (CLD04_12950) | tasA | 2424294..2425079 (-) | 786 | WP_017696201.1 | biofilm matrix protein TasA | - |
| CLD04_RS12955 (CLD04_12955) | sipW | 2425144..2425716 (-) | 573 | WP_072557060.1 | signal peptidase I SipW | - |
| CLD04_RS12960 (CLD04_12960) | tapA | 2425700..2426455 (-) | 756 | WP_017696199.1 | amyloid fiber anchoring/assembly protein TapA | - |
| CLD04_RS12965 (CLD04_12965) | yqzG | 2426726..2427052 (+) | 327 | WP_026113671.1 | YqzG/YhdC family protein | - |
| CLD04_RS12970 (CLD04_12970) | spoIITA | 2427094..2427273 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| CLD04_RS12975 (CLD04_12975) | comGG | 2427344..2427718 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| CLD04_RS12980 (CLD04_12980) | comGF | 2427719..2428102 (-) | 384 | WP_041334965.1 | ComG operon protein ComGF | Machinery gene |
| CLD04_RS12985 (CLD04_12985) | comGE | 2428128..2428475 (-) | 348 | WP_041334967.1 | ComG operon protein 5 | Machinery gene |
Sequence
Protein
Download Length: 57 a.a. Molecular weight: 6601.52 Da Isoelectric Point: 6.7231
>NTDB_id=245548 CLD04_RS12940 WP_003230187.1 2423659..2423832(+) (sinI) [Bacillus subtilis strain TLO3]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF
Nucleotide
Download Length: 174 bp
>NTDB_id=245548 CLD04_RS12940 WP_003230187.1 2423659..2423832(+) (sinI) [Bacillus subtilis strain TLO3]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |