Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | CLI14_RS11360 | Genome accession | NZ_CP023208 |
| Coordinates | 2483983..2484600 (+) | Length | 205 a.a. |
| NCBI ID | WP_013857672.1 | Uniprot ID | Q8VQC6 |
| Organism | Vibrio anguillarum strain ATCC-68554 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2478983..2489600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLI14_RS11340 (CLI14_11340) | - | 2479348..2480268 (-) | 921 | WP_026027559.1 | ABC transporter ATP-binding protein | - |
| CLI14_RS11345 (CLI14_11345) | - | 2480410..2482077 (-) | 1668 | WP_038148651.1 | SulP family inorganic anion transporter | - |
| CLI14_RS11350 (CLI14_11350) | can | 2482328..2482996 (+) | 669 | WP_013857670.1 | carbonate dehydratase | - |
| CLI14_RS11355 (CLI14_11355) | hpt | 2483081..2483611 (-) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| CLI14_RS11360 (CLI14_11360) | opaR | 2483983..2484600 (+) | 618 | WP_013857672.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| CLI14_RS11365 (CLI14_11365) | lpdA | 2484718..2486145 (-) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| CLI14_RS11370 (CLI14_11370) | aceF | 2486446..2488329 (-) | 1884 | WP_013857674.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23700.30 Da Isoelectric Point: 6.3812
>NTDB_id=245321 CLI14_RS11360 WP_013857672.1 2483983..2484600(+) (opaR) [Vibrio anguillarum strain ATCC-68554]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=245321 CLI14_RS11360 WP_013857672.1 2483983..2484600(+) (opaR) [Vibrio anguillarum strain ATCC-68554]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.683 |
98.537 |
0.805 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |