Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   DBA17_RS21160 Genome accession   NZ_CP028719
Coordinates   4797514..4798638 (-) Length   374 a.a.
NCBI ID   WP_037660305.1    Uniprot ID   A0A1X4GT45
Organism   Streptomyces sp. endophyte_N2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4792514..4803638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBA17_RS21135 cseB 4793332..4794036 (-) 705 WP_128791110.1 two-component system response regulator CseB -
  DBA17_RS21140 - 4794088..4794753 (-) 666 WP_202930349.1 hypothetical protein -
  DBA17_RS21145 - 4794741..4795280 (-) 540 WP_037660309.1 SigE family RNA polymerase sigma factor -
  DBA17_RS21150 - 4795562..4796437 (-) 876 WP_085565927.1 A/G-specific adenine glycosylase -
  DBA17_RS21155 - 4796617..4797465 (+) 849 WP_206660458.1 hypothetical protein -
  DBA17_RS21160 disA 4797514..4798638 (-) 1125 WP_037660305.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DBA17_RS21165 radA/sms 4798719..4800128 (-) 1410 WP_128791111.1 DNA repair protein RadA Machinery gene
  DBA17_RS21175 - 4800489..4802141 (+) 1653 WP_128791113.1 sigma-70 family RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 39932.68 Da        Isoelectric Point: 4.9187

>NTDB_id=245264 DBA17_RS21160 WP_037660305.1 4797514..4798638(-) (disA) [Streptomyces sp. endophyte_N2]
MAANDRAAAPGKSGGSAGSDGLMRAALSAVAPGTAMRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALSELNALTQAELIEVGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=245264 DBA17_RS21160 WP_037660305.1 4797514..4798638(-) (disA) [Streptomyces sp. endophyte_N2]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCGCCCT
GAGCGCCGTGGCACCCGGTACGGCCATGCGGGACGGCCTGGAGCGCATCCTGCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCGCCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCCTCGGACCTCTCGAAGATCCTGCGCGCGGGCGTGCAGCTGGTCCC
GGACCCGACCATCCCCACCGAGGAGACCGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTGTCCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGTCAGCGCCGTGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGTGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTGGCGGGCACCCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCCGCCGTCGCGCAGCGTCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTGCTCGCGCTCCAGCTGGAGGAGTTGATCGCG
GGGGTCGAGCCGGACCGGGAGCTGGTCGTACGGGACTACGTGCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTGGAGGA
GGCCCTGTCCGAGCTGAACGCGCTCACCCAGGCCGAGCTGATCGAGGTCGGCACCGTGGCGCGGGCGCTGGGCTACACCG
GGTCGCCCGAGACCCTGGACTCCGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCCGCGAGTGTGGACGACCTGCAGACGGTGGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTCTCGCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X4GT45

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.143

93.583

0.422

Multiple sequence alignment