Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   CK945_RS18470 Genome accession   NZ_CP023168
Coordinates   3551754..3554069 (-) Length   771 a.a.
NCBI ID   WP_035337589.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain 14DA11     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546754..3559069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK945_RS18430 - 3547219..3547650 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  CK945_RS18435 - 3547650..3547991 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  CK945_RS18440 - 3547984..3549462 (+) 1479 WP_026580052.1 Na+/H+ antiporter subunit D -
  CK945_RS18445 - 3549468..3549944 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  CK945_RS18450 - 3549944..3550228 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CK945_RS18455 mnhG 3550212..3550586 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  CK945_RS18460 - 3550623..3551012 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  CK945_RS18465 comA 3551029..3551667 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  CK945_RS18470 comP 3551754..3554069 (-) 2316 WP_035337589.1 sensor histidine kinase Regulator
  CK945_RS18475 comX 3554090..3554260 (-) 171 WP_020452790.1 competence pheromone ComX -
  CK945_RS18480 - 3554232..3555143 (-) 912 WP_035337591.1 polyprenyl synthetase family protein -
  CK945_RS18485 degQ 3555330..3555470 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CK945_RS18495 - 3555956..3556303 (+) 348 WP_223254849.1 hypothetical protein -
  CK945_RS18500 - 3556346..3557566 (-) 1221 WP_035337594.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 771 a.a.        Molecular weight: 89301.09 Da        Isoelectric Point: 7.0414

>NTDB_id=245130 CK945_RS18470 WP_035337589.1 3551754..3554069(-) (comP) [Bacillus paralicheniformis strain 14DA11]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMDHLEHVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGNLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=245130 CK945_RS18470 WP_035337589.1 3551754..3554069(-) (comP) [Bacillus paralicheniformis strain 14DA11]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGC
ATTAACTTATTGTCGTTCTTTATTTCGACGGTCATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTCCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAA
ATCGTCGAAGTCGACCGAGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAGA
ACGTCTTGAAAATCGGCGAGCTGATGGACCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCAGCGTGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTTGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAATCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(570-639)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(682-769)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.29

100

0.536

Multiple sequence alignment