Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SYC_RS06415 | Genome accession | NC_006576 |
| Coordinates | 1320892..1321254 (-) | Length | 120 a.a. |
| NCBI ID | WP_011377525.1 | Uniprot ID | Q31RI6 |
| Organism | Synechococcus elongatus PCC 6301 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1315892..1326254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYC_RS06390 | - | 1316550..1316840 (-) | 291 | WP_039755475.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SYC_RS06395 | - | 1316837..1317067 (-) | 231 | WP_011377528.1 | addiction module protein | - |
| SYC_RS06400 (syc1208_c) | - | 1317402..1318049 (-) | 648 | WP_011243520.1 | Coq4 family protein | - |
| SYC_RS06405 (syc1209_c) | - | 1318185..1319273 (-) | 1089 | WP_011243521.1 | potassium channel family protein | - |
| SYC_RS06410 (syc1210_d) | comA | 1319435..1320874 (+) | 1440 | WP_011377526.1 | phospholipase D-like domain-containing protein | Machinery gene |
| SYC_RS06415 (syc1211_c) | ssb | 1320892..1321254 (-) | 363 | WP_011377525.1 | single-stranded DNA-binding protein | Machinery gene |
| SYC_RS06420 (syc1212_d) | - | 1321483..1322484 (+) | 1002 | WP_039755477.1 | rod shape-determining protein | - |
| SYC_RS06425 (syc1213_d) | mreC | 1322509..1323258 (+) | 750 | WP_011243525.1 | rod shape-determining protein MreC | - |
| SYC_RS06430 (syc1214_d) | mreD | 1323219..1323902 (+) | 684 | WP_011243526.1 | rod shape-determining protein MreD | - |
| SYC_RS06435 (syc1215_c) | ftsH3 | 1324169..1326010 (-) | 1842 | WP_011243527.1 | ATP-dependent zinc metalloprotease FtsH3 | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13556.21 Da Isoelectric Point: 7.9768
>NTDB_id=24499 SYC_RS06415 WP_011377525.1 1320892..1321254(-) (ssb) [Synechococcus elongatus PCC 6301]
MSLNVVNLVGRVGRDPEARYFESGSVVCKFSLAVNRRSRNDEPDWFNVEMWGREAQVAIDYVKKGSLIGISGALKIESWT
DRNNNQRTTPVVRANRLELLGSRRDQEGGMAPRDPDSDLF
MSLNVVNLVGRVGRDPEARYFESGSVVCKFSLAVNRRSRNDEPDWFNVEMWGREAQVAIDYVKKGSLIGISGALKIESWT
DRNNNQRTTPVVRANRLELLGSRRDQEGGMAPRDPDSDLF
Nucleotide
Download Length: 363 bp
>NTDB_id=24499 SYC_RS06415 WP_011377525.1 1320892..1321254(-) (ssb) [Synechococcus elongatus PCC 6301]
ATGAGCTTAAATGTTGTCAACTTGGTGGGGCGCGTCGGTCGTGACCCCGAAGCTCGTTACTTTGAGTCGGGTTCGGTCGT
TTGTAAGTTTTCCCTGGCGGTCAATCGCCGCAGCCGCAATGATGAGCCTGATTGGTTCAACGTTGAGATGTGGGGCCGCG
AAGCCCAGGTTGCGATCGACTATGTCAAGAAAGGCAGTCTGATCGGCATCAGTGGTGCTCTCAAGATTGAGAGCTGGACT
GATCGCAACAACAATCAGCGCACCACACCCGTCGTCCGGGCCAATCGTCTTGAGCTGCTGGGCTCGCGCCGAGATCAAGA
GGGCGGCATGGCTCCCCGCGATCCAGACAGCGATCTGTTCTAA
ATGAGCTTAAATGTTGTCAACTTGGTGGGGCGCGTCGGTCGTGACCCCGAAGCTCGTTACTTTGAGTCGGGTTCGGTCGT
TTGTAAGTTTTCCCTGGCGGTCAATCGCCGCAGCCGCAATGATGAGCCTGATTGGTTCAACGTTGAGATGTGGGGCCGCG
AAGCCCAGGTTGCGATCGACTATGTCAAGAAAGGCAGTCTGATCGGCATCAGTGGTGCTCTCAAGATTGAGAGCTGGACT
GATCGCAACAACAATCAGCGCACCACACCCGTCGTCCGGGCCAATCGTCTTGAGCTGCTGGGCTCGCGCCGAGATCAAGA
GGGCGGCATGGCTCCCCGCGATCCAGACAGCGATCTGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
37.5 |
100 |
0.375 |