Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | SYC_RS00960 | Genome accession | NC_006576 |
| Coordinates | 212963..213562 (-) | Length | 199 a.a. |
| NCBI ID | WP_011242500.1 | Uniprot ID | Q31NH0 |
| Organism | Synechococcus elongatus PCC 6301 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 207963..218562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYC_RS00950 (syc0185_d) | corA | 211273..212595 (+) | 1323 | WP_011242499.1 | magnesium/cobalt transporter CorA | - |
| SYC_RS00955 | - | 212598..212837 (-) | 240 | WP_011378005.1 | hypothetical protein | - |
| SYC_RS00960 (syc0186_c) | recR | 212963..213562 (-) | 600 | WP_011242500.1 | recombination mediator RecR | Machinery gene |
| SYC_RS00965 (syc0187_c) | - | 213808..214143 (-) | 336 | WP_011242501.1 | SH3 domain-containing protein | - |
| SYC_RS00970 (syc0188_c) | - | 214171..215538 (-) | 1368 | WP_011242502.1 | cytochrome P450 | - |
| SYC_RS00975 (syc0189_d) | menA | 215597..216508 (+) | 912 | WP_011242503.1 | 2-carboxy-1,4-naphthoquinone phytyltransferase | - |
| SYC_RS00980 (syc0190_d) | - | 216740..217438 (+) | 699 | WP_011378003.1 | MarC family protein | - |
| SYC_RS14130 | - | 217524..217658 (-) | 135 | WP_265574994.1 | hypothetical protein | - |
| SYC_RS00985 (syc0191_c) | - | 217697..218113 (-) | 417 | WP_011242505.1 | HHL1-like protein | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 21983.47 Da Isoelectric Point: 6.9425
>NTDB_id=24476 SYC_RS00960 WP_011242500.1 212963..213562(-) (recR) [Synechococcus elongatus PCC 6301]
MSVYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCFHLSSEDLCNICRDPKRDA
QTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQLTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQL
LKPFTRVTRIAFGLPMGGDLEYADEVTLARALEGRRDLT
MSVYTRPLARLIEHLQKLPGVGPKTAQRLALHLIQRPEAEIAAFAEALLAAKQQVGHCQRCFHLSSEDLCNICRDPKRDA
QTICVVADPRDVIALEKTREYKGLYHVLGGLISPMDGIGPEQLTVQALVRRVAQEQTQEVIMAISPSVEGETTTLYVGQL
LKPFTRVTRIAFGLPMGGDLEYADEVTLARALEGRRDLT
Nucleotide
Download Length: 600 bp
>NTDB_id=24476 SYC_RS00960 WP_011242500.1 212963..213562(-) (recR) [Synechococcus elongatus PCC 6301]
GTGTCTGTTTATACCCGTCCGCTGGCCCGCCTGATTGAGCACCTACAGAAACTGCCAGGTGTTGGCCCCAAAACGGCTCA
ACGGTTAGCACTGCACCTCATTCAACGACCCGAAGCTGAAATCGCAGCCTTTGCGGAAGCATTGCTAGCAGCCAAGCAAC
AAGTGGGGCACTGTCAGCGCTGTTTTCATCTCTCTTCGGAAGACCTCTGCAACATCTGCCGAGATCCCAAGCGCGACGCC
CAAACCATCTGCGTGGTGGCTGATCCGCGCGACGTGATCGCCCTTGAGAAAACCCGCGAATATAAGGGGCTCTATCACGT
GCTGGGTGGGTTGATTTCGCCCATGGATGGCATCGGTCCTGAGCAGCTAACGGTGCAGGCGCTGGTACGGCGAGTCGCTC
AGGAGCAAACGCAGGAGGTGATTATGGCGATTAGCCCCAGCGTTGAGGGCGAAACAACGACGCTCTATGTAGGGCAGCTT
TTGAAACCCTTCACCCGTGTGACGCGCATTGCCTTTGGTTTACCGATGGGGGGTGACTTGGAGTACGCCGATGAAGTGAC
GCTGGCTCGAGCGCTGGAGGGTCGCCGCGATCTGACTTAG
GTGTCTGTTTATACCCGTCCGCTGGCCCGCCTGATTGAGCACCTACAGAAACTGCCAGGTGTTGGCCCCAAAACGGCTCA
ACGGTTAGCACTGCACCTCATTCAACGACCCGAAGCTGAAATCGCAGCCTTTGCGGAAGCATTGCTAGCAGCCAAGCAAC
AAGTGGGGCACTGTCAGCGCTGTTTTCATCTCTCTTCGGAAGACCTCTGCAACATCTGCCGAGATCCCAAGCGCGACGCC
CAAACCATCTGCGTGGTGGCTGATCCGCGCGACGTGATCGCCCTTGAGAAAACCCGCGAATATAAGGGGCTCTATCACGT
GCTGGGTGGGTTGATTTCGCCCATGGATGGCATCGGTCCTGAGCAGCTAACGGTGCAGGCGCTGGTACGGCGAGTCGCTC
AGGAGCAAACGCAGGAGGTGATTATGGCGATTAGCCCCAGCGTTGAGGGCGAAACAACGACGCTCTATGTAGGGCAGCTT
TTGAAACCCTTCACCCGTGTGACGCGCATTGCCTTTGGTTTACCGATGGGGGGTGACTTGGAGTACGCCGATGAAGTGAC
GCTGGCTCGAGCGCTGGAGGGTCGCCGCGATCTGACTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
53.571 |
98.492 |
0.528 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.761 |
98.995 |
0.503 |
| recR | Streptococcus pneumoniae R6 |
48.223 |
98.995 |
0.477 |