Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | CK207_RS02955 | Genome accession | NZ_CP023054 |
| Coordinates | 581369..581986 (-) | Length | 205 a.a. |
| NCBI ID | WP_017043694.1 | Uniprot ID | A0A233HMW8 |
| Organism | Vibrio anguillarum strain VIB43 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 576369..586986
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK207_RS02945 (CK207_02945) | aceF | 577640..579523 (+) | 1884 | WP_019282813.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| CK207_RS02950 (CK207_02950) | lpdA | 579824..581251 (+) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| CK207_RS02955 (CK207_02955) | opaR | 581369..581986 (-) | 618 | WP_017043694.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| CK207_RS02960 (CK207_02960) | hpt | 582358..582888 (+) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| CK207_RS02965 (CK207_02965) | can | 582976..583644 (-) | 669 | WP_010319545.1 | carbonate dehydratase | - |
| CK207_RS02970 (CK207_02970) | - | 583894..585561 (+) | 1668 | WP_043004678.1 | SulP family inorganic anion transporter | - |
| CK207_RS02975 (CK207_02975) | - | 585695..586615 (+) | 921 | WP_029388351.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23672.24 Da Isoelectric Point: 6.1461
>NTDB_id=244601 CK207_RS02955 WP_017043694.1 581369..581986(-) (opaR) [Vibrio anguillarum strain VIB43]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=244601 CK207_RS02955 WP_017043694.1 581369..581986(-) (opaR) [Vibrio anguillarum strain VIB43]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGCGTACTCGTGAAAAGCTACCTCAGTATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGCGTACTCGTGAAAAGCTACCTCAGTATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
82.178 |
98.537 |
0.81 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |