Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Aba9102_RS01460 | Genome accession | NZ_CP023029 |
| Coordinates | 305090..305470 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain 9102 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 300090..310470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9102_RS01430 (Aba9102_01425) | tadA | 300209..300712 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| Aba9102_RS01435 (Aba9102_01430) | - | 300719..301843 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Aba9102_RS01440 (Aba9102_01435) | ung | 301840..302553 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| Aba9102_RS01445 (Aba9102_01440) | - | 302604..303200 (-) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Aba9102_RS01450 (Aba9102_01445) | gspK | 303430..304389 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| Aba9102_RS01455 (Aba9102_01450) | xcpW | 304389..305090 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Aba9102_RS01460 (Aba9102_01455) | xcpV | 305090..305470 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| Aba9102_RS01465 (Aba9102_01460) | - | 305460..306014 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| Aba9102_RS01470 (Aba9102_01465) | - | 306024..306632 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| Aba9102_RS01475 (Aba9102_01470) | - | 306670..307443 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| Aba9102_RS01480 (Aba9102_01475) | - | 307461..307802 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| Aba9102_RS01485 (Aba9102_01480) | - | 307814..308794 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| Aba9102_RS01490 (Aba9102_01485) | kdsB | 308806..309567 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=244248 Aba9102_RS01460 WP_000836914.1 305090..305470(-) (xcpV) [Acinetobacter baumannii strain 9102]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=244248 Aba9102_RS01460 WP_000836914.1 305090..305470(-) (xcpV) [Acinetobacter baumannii strain 9102]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |