Detailed information NTG0244247

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba9102_RS01455
• Genome accession: NZ_CP023029
• Coordinates: 304389..305090 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain 9102
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 299389..310090

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba9102_RS01425 (Aba9102_01420)	-	299696..300139 (-)	444	WP_001246675.1	SRPBCC family protein	-
Aba9102_RS01430 (Aba9102_01425)	tadA	300209..300712 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
Aba9102_RS01435 (Aba9102_01430)	-	300719..301843 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba9102_RS01440 (Aba9102_01435)	ung	301840..302553 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
Aba9102_RS01445 (Aba9102_01440)	-	302604..303200 (-)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba9102_RS01450 (Aba9102_01445)	gspK	303430..304389 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
Aba9102_RS01455 (Aba9102_01450)	xcpW	304389..305090 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba9102_RS01460 (Aba9102_01455)	xcpV	305090..305470 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba9102_RS01465 (Aba9102_01460)	-	305460..306014 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba9102_RS01470 (Aba9102_01465)	-	306024..306632 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba9102_RS01475 (Aba9102_01470)	-	306670..307443 (-)	774	WP_000497300.1	TatD family hydrolase	-
Aba9102_RS01480 (Aba9102_01475)	-	307461..307802 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
Aba9102_RS01485 (Aba9102_01480)	-	307814..308794 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
Aba9102_RS01490 (Aba9102_01485)	kdsB	308806..309567 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=244247 Aba9102_RS01455 WP_000594579.1 304389..305090(-) (xcpW) [Acinetobacter baumannii strain 9102]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=244247 Aba9102_RS01455 WP_000594579.1 304389..305090(-) (xcpW) [Acinetobacter baumannii strain 9102]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983