Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Aba10324_RS01365 | Genome accession | NZ_CP023022 |
| Coordinates | 282611..282991 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 10324 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 277611..287991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba10324_RS01335 (Aba10324_01340) | kdsB | 278514..279275 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| Aba10324_RS01340 (Aba10324_01345) | - | 279287..280267 (+) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| Aba10324_RS01345 (Aba10324_01350) | - | 280279..280620 (+) | 342 | WP_049581987.1 | PilZ domain-containing protein | - |
| Aba10324_RS01350 (Aba10324_01355) | - | 280638..281411 (+) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| Aba10324_RS01355 (Aba10324_01360) | - | 281449..282057 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| Aba10324_RS01360 (Aba10324_01365) | - | 282067..282621 (+) | 555 | WP_000841372.1 | type II secretion system protein | - |
| Aba10324_RS01365 (Aba10324_01370) | xcpV | 282611..282991 (+) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| Aba10324_RS01370 (Aba10324_01375) | xcpW | 282991..283692 (+) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Aba10324_RS01375 (Aba10324_01380) | gspK | 283692..284651 (+) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| Aba10324_RS01380 (Aba10324_01385) | - | 284881..285477 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Aba10324_RS01385 (Aba10324_01390) | ung | 285528..286241 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| Aba10324_RS01390 (Aba10324_01395) | - | 286238..287362 (+) | 1125 | WP_118877968.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Aba10324_RS01395 (Aba10324_01400) | tadA | 287369..287872 (+) | 504 | WP_118877970.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=244157 Aba10324_RS01365 WP_000836909.1 282611..282991(+) (xcpV) [Acinetobacter baumannii strain 10324]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=244157 Aba10324_RS01365 WP_000836909.1 282611..282991(+) (xcpV) [Acinetobacter baumannii strain 10324]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |